Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
APOA4P06727 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
APOA4P06727 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
APOA4P06727 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
APOA4P06727 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
APOA4P06727 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
APOA4P06727 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
APOA4P06727 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
APOA4P06727 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.41■□□□□ 0.7
APOA4P06727 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
APOA4P06727 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
APOA4P06727 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
APOA4P06727 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
APOA4P06727 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
APOA4P06727 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
APOA4P06727 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
APOA4P06727 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.41■□□□□ 0.7
APOA4P06727 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
APOA4P06727 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
APOA4P06727 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
APOA4P06727 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
APOA4P06727 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.41■□□□□ 0.7
APOA4P06727 POM121L13P-201ENST00000422362 380 ntBASIC19.41■□□□□ 0.7
APOA4P06727 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.41■□□□□ 0.7
APOA4P06727 AC026366.1-201ENST00000488803 879 ntBASIC19.41■□□□□ 0.7
APOA4P06727 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.41■□□□□ 0.7
APOA4P06727 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
APOA4P06727 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.41■□□□□ 0.7
APOA4P06727 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.41■□□□□ 0.7
APOA4P06727 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
APOA4P06727 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
APOA4P06727 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.41■□□□□ 0.7
APOA4P06727 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
APOA4P06727 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
APOA4P06727 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.41■□□□□ 0.7
APOA4P06727 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
APOA4P06727 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
APOA4P06727 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
APOA4P06727 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
APOA4P06727 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.41■□□□□ 0.7
APOA4P06727 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
APOA4P06727 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
APOA4P06727 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
APOA4P06727 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
APOA4P06727 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
APOA4P06727 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.4■□□□□ 0.7
APOA4P06727 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
APOA4P06727 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.4■□□□□ 0.7
APOA4P06727 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
APOA4P06727 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
APOA4P06727 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
APOA4P06727 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
APOA4P06727 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
APOA4P06727 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
APOA4P06727 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
APOA4P06727 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
APOA4P06727 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.4■□□□□ 0.7
APOA4P06727 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
APOA4P06727 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
APOA4P06727 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.4■□□□□ 0.7
APOA4P06727 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
APOA4P06727 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
APOA4P06727 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
APOA4P06727 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
APOA4P06727 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
APOA4P06727 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
APOA4P06727 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.4■□□□□ 0.7
APOA4P06727 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
APOA4P06727 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
APOA4P06727 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
APOA4P06727 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
APOA4P06727 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
APOA4P06727 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
APOA4P06727 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
APOA4P06727 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
APOA4P06727 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
APOA4P06727 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.39■□□□□ 0.69
APOA4P06727 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.39■□□□□ 0.69
APOA4P06727 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
APOA4P06727 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
APOA4P06727 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
APOA4P06727 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.39■□□□□ 0.69
APOA4P06727 AC008403.3-201ENST00000598924 454 ntBASIC19.39■□□□□ 0.69
APOA4P06727 AL121829.2-201ENST00000620908 328 ntBASIC19.39■□□□□ 0.69
APOA4P06727 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
APOA4P06727 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.39■□□□□ 0.69
APOA4P06727 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
APOA4P06727 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
APOA4P06727 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
APOA4P06727 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
APOA4P06727 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
APOA4P06727 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
APOA4P06727 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
APOA4P06727 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
APOA4P06727 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.38■□□□□ 0.69
APOA4P06727 AC120498.9-201ENST00000339021 3867 ntBASIC19.38■□□□□ 0.69
APOA4P06727 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
APOA4P06727 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.38■□□□□ 0.69
APOA4P06727 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
APOA4P06727 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms