Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
HLA-DQB2P05538 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DQB2P05538 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DQB2P05538 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DQB2P05538 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DQB2P05538 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DQB2P05538 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
HLA-DQB2P05538 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.68■□□□□ 0.74
HLA-DQB2P05538 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
HLA-DQB2P05538 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DQB2P05538 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DQB2P05538 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DQB2P05538 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DQB2P05538 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DQB2P05538 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DQB2P05538 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.68■□□□□ 0.74
HLA-DQB2P05538 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DQB2P05538 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DQB2P05538 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.68■□□□□ 0.74
HLA-DQB2P05538 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
HLA-DQB2P05538 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.68■□□□□ 0.74
HLA-DQB2P05538 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.68■□□□□ 0.74
HLA-DQB2P05538 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.68■□□□□ 0.74
HLA-DQB2P05538 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
HLA-DQB2P05538 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DQB2P05538 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
HLA-DQB2P05538 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.68■□□□□ 0.74
HLA-DQB2P05538 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DQB2P05538 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DQB2P05538 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DQB2P05538 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DQB2P05538 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.67■□□□□ 0.74
HLA-DQB2P05538 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DQB2P05538 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DQB2P05538 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DQB2P05538 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DQB2P05538 AL158047.1-201ENST00000445918 881 ntBASIC19.67■□□□□ 0.74
HLA-DQB2P05538 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DQB2P05538 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.67■□□□□ 0.74
HLA-DQB2P05538 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DQB2P05538 HTR7P1-201ENST00000538670 1336 ntBASIC19.67■□□□□ 0.74
HLA-DQB2P05538 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.67■□□□□ 0.74
HLA-DQB2P05538 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DQB2P05538 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.67■□□□□ 0.74
HLA-DQB2P05538 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DQB2P05538 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DQB2P05538 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DQB2P05538 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
HLA-DQB2P05538 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DQB2P05538 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
HLA-DQB2P05538 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DQB2P05538 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DQB2P05538 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DQB2P05538 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
HLA-DQB2P05538 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.66■□□□□ 0.74
HLA-DQB2P05538 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DQB2P05538 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DQB2P05538 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DQB2P05538 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.66■□□□□ 0.74
HLA-DQB2P05538 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DQB2P05538 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DQB2P05538 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.66■□□□□ 0.74
HLA-DQB2P05538 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.66■□□□□ 0.74
HLA-DQB2P05538 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.66■□□□□ 0.74
HLA-DQB2P05538 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
HLA-DQB2P05538 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.66■□□□□ 0.74
HLA-DQB2P05538 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
HLA-DQB2P05538 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.66■□□□□ 0.74
HLA-DQB2P05538 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.66■□□□□ 0.74
HLA-DQB2P05538 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.66■□□□□ 0.74
HLA-DQB2P05538 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.66■□□□□ 0.74
HLA-DQB2P05538 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.66■□□□□ 0.74
HLA-DQB2P05538 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.66■□□□□ 0.74
HLA-DQB2P05538 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DQB2P05538 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DQB2P05538 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.66■□□□□ 0.74
HLA-DQB2P05538 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
HLA-DQB2P05538 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DQB2P05538 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
HLA-DQB2P05538 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DQB2P05538 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DQB2P05538 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.65■□□□□ 0.74
HLA-DQB2P05538 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DQB2P05538 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DQB2P05538 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
HLA-DQB2P05538 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DQB2P05538 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DQB2P05538 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.65■□□□□ 0.74
HLA-DQB2P05538 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.65■□□□□ 0.74
HLA-DQB2P05538 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DQB2P05538 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.65■□□□□ 0.74
HLA-DQB2P05538 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.65■□□□□ 0.74
HLA-DQB2P05538 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.65■□□□□ 0.74
HLA-DQB2P05538 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
HLA-DQB2P05538 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.65■□□□□ 0.74
HLA-DQB2P05538 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DQB2P05538 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DQB2P05538 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DQB2P05538 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
HLA-DQB2P05538 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms