Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC15.16■□□□□ 0.02
TOMM40O96008 PARL-206ENST00000435888 1098 ntTSL 5 BASIC15.16■□□□□ 0.02
TOMM40O96008 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TOMM40O96008 AL137784.2-201ENST00000607332 1000 ntBASIC15.16■□□□□ 0.02
TOMM40O96008 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC15.16■□□□□ 0.02
TOMM40O96008 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC15.16■□□□□ 0.02
TOMM40O96008 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TOMM40O96008 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TOMM40O96008 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TOMM40O96008 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC15.16■□□□□ 0.02
TOMM40O96008 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC15.16■□□□□ 0.02
TOMM40O96008 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
TOMM40O96008 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
TOMM40O96008 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC15.16■□□□□ 0.02
TOMM40O96008 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TOMM40O96008 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TOMM40O96008 TFP1-202ENST00000475455 1573 ntBASIC15.15■□□□□ 0.02
TOMM40O96008 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC15.15■□□□□ 0.02
TOMM40O96008 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TOMM40O96008 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC15.15■□□□□ 0.02
TOMM40O96008 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TOMM40O96008 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TOMM40O96008 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.15■□□□□ 0.02
TOMM40O96008 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TOMM40O96008 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TOMM40O96008 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TOMM40O96008 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TOMM40O96008 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TOMM40O96008 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TOMM40O96008 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TOMM40O96008 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TOMM40O96008 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TOMM40O96008 RER1-204ENST00000378518 522 ntTSL 3 BASIC15.15■□□□□ 0.02
TOMM40O96008 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC15.15■□□□□ 0.02
TOMM40O96008 NME6-213ENST00000451657 871 ntTSL 2 BASIC15.15■□□□□ 0.02
TOMM40O96008 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC15.15■□□□□ 0.02
TOMM40O96008 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC15.15■□□□□ 0.02
TOMM40O96008 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC15.15■□□□□ 0.02
TOMM40O96008 AC005829.2-201ENST00000571422 1056 ntBASIC15.15■□□□□ 0.02
TOMM40O96008 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TOMM40O96008 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TOMM40O96008 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TOMM40O96008 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TOMM40O96008 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
TOMM40O96008 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TOMM40O96008 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TOMM40O96008 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TOMM40O96008 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC15.15■□□□□ 0.02
TOMM40O96008 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC15.15■□□□□ 0.02
TOMM40O96008 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC15.15■□□□□ 0.02
TOMM40O96008 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC15.15■□□□□ 0.02
TOMM40O96008 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
TOMM40O96008 AC120498.9-201ENST00000339021 3867 ntBASIC15.15■□□□□ 0.02
TOMM40O96008 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TOMM40O96008 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TOMM40O96008 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TOMM40O96008 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
TOMM40O96008 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC15.14■□□□□ 0.01
TOMM40O96008 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TOMM40O96008 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC15.14■□□□□ 0.01
TOMM40O96008 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TOMM40O96008 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TOMM40O96008 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TOMM40O96008 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TOMM40O96008 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC15.14■□□□□ 0.01
TOMM40O96008 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
TOMM40O96008 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TOMM40O96008 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TOMM40O96008 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TOMM40O96008 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TOMM40O96008 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TOMM40O96008 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TOMM40O96008 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
TOMM40O96008 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC15.14■□□□□ 0.01
TOMM40O96008 LINC01465-201ENST00000408887 1940 ntBASIC15.14■□□□□ 0.01
TOMM40O96008 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
TOMM40O96008 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TOMM40O96008 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC15.14■□□□□ 0.01
TOMM40O96008 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC15.14■□□□□ 0.01
TOMM40O96008 GGT1-206ENST00000404223 952 ntTSL 2 BASIC15.14■□□□□ 0.01
TOMM40O96008 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC15.14■□□□□ 0.01
TOMM40O96008 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC15.14■□□□□ 0.01
TOMM40O96008 OAS3-207ENST00000551007 998 ntTSL 2 BASIC15.14■□□□□ 0.01
TOMM40O96008 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TOMM40O96008 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
TOMM40O96008 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TOMM40O96008 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC15.14■□□□□ 0.01
TOMM40O96008 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TOMM40O96008 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TOMM40O96008 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TOMM40O96008 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TOMM40O96008 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC15.14■□□□□ 0.01
TOMM40O96008 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TOMM40O96008 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TOMM40O96008 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
TOMM40O96008 AC005332.8-201ENST00000622750 2735 ntBASIC15.14■□□□□ 0.01
TOMM40O96008 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC15.14■□□□□ 0.01
TOMM40O96008 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TOMM40O96008 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
TOMM40O96008 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms