Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN1O95832 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
CLDN1O95832 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.3■□□□□ 0.36
CLDN1O95832 HOMER2P1-201ENST00000455653 964 ntBASIC17.3■□□□□ 0.36
CLDN1O95832 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.3■□□□□ 0.36
CLDN1O95832 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.3■□□□□ 0.36
CLDN1O95832 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN1O95832 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.3■□□□□ 0.36
CLDN1O95832 AC130371.2-201ENST00000619443 611 ntBASIC17.3■□□□□ 0.36
CLDN1O95832 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN1O95832 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.3■□□□□ 0.36
CLDN1O95832 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN1O95832 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN1O95832 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.3■□□□□ 0.36
CLDN1O95832 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN1O95832 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN1O95832 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.3■□□□□ 0.36
CLDN1O95832 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN1O95832 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
CLDN1O95832 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CLDN1O95832 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.29■□□□□ 0.36
CLDN1O95832 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.29■□□□□ 0.36
CLDN1O95832 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN1O95832 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.29■□□□□ 0.36
CLDN1O95832 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN1O95832 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN1O95832 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.29■□□□□ 0.36
CLDN1O95832 CCR12P-201ENST00000446203 998 ntBASIC17.29■□□□□ 0.36
CLDN1O95832 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN1O95832 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.29■□□□□ 0.36
CLDN1O95832 AP000692.2-201ENST00000608391 879 ntBASIC17.29■□□□□ 0.36
CLDN1O95832 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
CLDN1O95832 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CLDN1O95832 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN1O95832 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CLDN1O95832 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN1O95832 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN1O95832 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN1O95832 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.29■□□□□ 0.36
CLDN1O95832 KRT8P36-201ENST00000489121 1440 ntBASIC17.29■□□□□ 0.36
CLDN1O95832 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN1O95832 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.29■□□□□ 0.36
CLDN1O95832 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN1O95832 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN1O95832 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN1O95832 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN1O95832 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN1O95832 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN1O95832 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN1O95832 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CLDN1O95832 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN1O95832 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN1O95832 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
CLDN1O95832 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.28■□□□□ 0.36
CLDN1O95832 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN1O95832 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN1O95832 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN1O95832 AC007663.1-201ENST00000438948 1240 ntBASIC17.28■□□□□ 0.36
CLDN1O95832 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.28■□□□□ 0.36
CLDN1O95832 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.28■□□□□ 0.36
CLDN1O95832 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.28■□□□□ 0.36
CLDN1O95832 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.28■□□□□ 0.36
CLDN1O95832 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN1O95832 GPALPP1-207ENST00000611650 899 ntBASIC17.28■□□□□ 0.36
CLDN1O95832 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.28■□□□□ 0.36
CLDN1O95832 AC131212.4-201ENST00000623606 975 ntBASIC17.28■□□□□ 0.36
CLDN1O95832 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN1O95832 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN1O95832 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.28■□□□□ 0.36
CLDN1O95832 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CLDN1O95832 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CLDN1O95832 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.28■□□□□ 0.36
CLDN1O95832 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN1O95832 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN1O95832 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.28■□□□□ 0.36
CLDN1O95832 AL049796.1-201ENST00000565336 1766 ntBASIC17.28■□□□□ 0.36
CLDN1O95832 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN1O95832 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN1O95832 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN1O95832 AL157384.1-201ENST00000445995 2473 ntBASIC17.27■□□□□ 0.36
CLDN1O95832 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN1O95832 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
CLDN1O95832 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN1O95832 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN1O95832 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CLDN1O95832 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN1O95832 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CLDN1O95832 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.27■□□□□ 0.36
CLDN1O95832 HLA-G-202ENST00000376815 851 ntBASIC17.27■□□□□ 0.36
CLDN1O95832 HLA-G-203ENST00000376818 1127 ntBASIC17.27■□□□□ 0.36
CLDN1O95832 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN1O95832 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.27■□□□□ 0.36
CLDN1O95832 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.27■□□□□ 0.36
CLDN1O95832 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.27■□□□□ 0.36
CLDN1O95832 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
CLDN1O95832 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN1O95832 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN1O95832 AC010653.2-201ENST00000623505 997 ntBASIC17.27■□□□□ 0.36
CLDN1O95832 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
CLDN1O95832 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms