Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.18■□□□□ 0.5
SNX4O95219 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.18■□□□□ 0.5
SNX4O95219 RPPH1-201ENST00000516869 333 ntBASIC18.18■□□□□ 0.5
SNX4O95219 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.18■□□□□ 0.5
SNX4O95219 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.18■□□□□ 0.5
SNX4O95219 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.18■□□□□ 0.5
SNX4O95219 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNX4O95219 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNX4O95219 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SNX4O95219 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNX4O95219 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNX4O95219 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.18■□□□□ 0.5
SNX4O95219 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
SNX4O95219 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
SNX4O95219 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SNX4O95219 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNX4O95219 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNX4O95219 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.18■□□□□ 0.5
SNX4O95219 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.17■□□□□ 0.5
SNX4O95219 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX4O95219 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.17■□□□□ 0.5
SNX4O95219 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.17■□□□□ 0.5
SNX4O95219 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX4O95219 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX4O95219 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SNX4O95219 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.17■□□□□ 0.5
SNX4O95219 AL158047.1-201ENST00000445918 881 ntBASIC18.17■□□□□ 0.5
SNX4O95219 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.17■□□□□ 0.5
SNX4O95219 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.17■□□□□ 0.5
SNX4O95219 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.17■□□□□ 0.5
SNX4O95219 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.17■□□□□ 0.5
SNX4O95219 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX4O95219 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.17■□□□□ 0.5
SNX4O95219 AL359736.2-201ENST00000621992 437 ntBASIC18.17■□□□□ 0.5
SNX4O95219 AP006294.2-201ENST00000641667 209 ntBASIC18.17■□□□□ 0.5
SNX4O95219 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX4O95219 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX4O95219 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.17■□□□□ 0.5
SNX4O95219 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX4O95219 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX4O95219 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SNX4O95219 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SNX4O95219 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SNX4O95219 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX4O95219 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
SNX4O95219 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX4O95219 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
SNX4O95219 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX4O95219 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX4O95219 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX4O95219 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX4O95219 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SNX4O95219 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX4O95219 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX4O95219 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SNX4O95219 AC005082.1-201ENST00000413042 2259 ntBASIC18.16■□□□□ 0.5
SNX4O95219 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX4O95219 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX4O95219 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SNX4O95219 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
SNX4O95219 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX4O95219 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX4O95219 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX4O95219 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.16■□□□□ 0.5
SNX4O95219 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX4O95219 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.16■□□□□ 0.5
SNX4O95219 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX4O95219 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SNX4O95219 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.16■□□□□ 0.5
SNX4O95219 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.16■□□□□ 0.5
SNX4O95219 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.16■□□□□ 0.5
SNX4O95219 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.16■□□□□ 0.5
SNX4O95219 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.16■□□□□ 0.5
SNX4O95219 FAM197Y4-202ENST00000622692 608 ntBASIC18.16■□□□□ 0.5
SNX4O95219 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.16■□□□□ 0.5
SNX4O95219 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX4O95219 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX4O95219 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX4O95219 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SNX4O95219 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.16■□□□□ 0.5
SNX4O95219 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SNX4O95219 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
SNX4O95219 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX4O95219 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SNX4O95219 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SNX4O95219 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX4O95219 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.16■□□□□ 0.5
SNX4O95219 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX4O95219 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNX4O95219 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNX4O95219 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNX4O95219 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.15■□□□□ 0.5
SNX4O95219 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.15■□□□□ 0.5
SNX4O95219 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.15■□□□□ 0.5
SNX4O95219 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SNX4O95219 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SNX4O95219 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX4O95219 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.15■□□□□ 0.5
SNX4O95219 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX4O95219 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms