Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTN3O95197 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.42■□□□□ 0.86
RTN3O95197 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.42■□□□□ 0.86
RTN3O95197 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.42■□□□□ 0.86
RTN3O95197 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.42■□□□□ 0.86
RTN3O95197 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.42■□□□□ 0.86
RTN3O95197 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.42■□□□□ 0.86
RTN3O95197 MIR6786-201ENST00000616843 113 ntBASIC20.42■□□□□ 0.86
RTN3O95197 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.42■□□□□ 0.86
RTN3O95197 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
RTN3O95197 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTN3O95197 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTN3O95197 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTN3O95197 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
RTN3O95197 LETM1P2-201ENST00000597330 2178 ntBASIC20.42■□□□□ 0.86
RTN3O95197 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTN3O95197 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RTN3O95197 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTN3O95197 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTN3O95197 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
RTN3O95197 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTN3O95197 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RTN3O95197 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTN3O95197 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.41■□□□□ 0.86
RTN3O95197 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RTN3O95197 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTN3O95197 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.41■□□□□ 0.86
RTN3O95197 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
RTN3O95197 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.41■□□□□ 0.86
RTN3O95197 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTN3O95197 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.41■□□□□ 0.86
RTN3O95197 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.41■□□□□ 0.86
RTN3O95197 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.41■□□□□ 0.86
RTN3O95197 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.41■□□□□ 0.86
RTN3O95197 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTN3O95197 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.41■□□□□ 0.86
RTN3O95197 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RTN3O95197 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
RTN3O95197 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTN3O95197 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.41■□□□□ 0.86
RTN3O95197 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTN3O95197 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTN3O95197 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
RTN3O95197 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RTN3O95197 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RTN3O95197 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RTN3O95197 MMP23A-201ENST00000234610 1017 ntBASIC20.4■□□□□ 0.86
RTN3O95197 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RTN3O95197 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RTN3O95197 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.4■□□□□ 0.86
RTN3O95197 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RTN3O95197 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.4■□□□□ 0.86
RTN3O95197 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.4■□□□□ 0.86
RTN3O95197 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.4■□□□□ 0.86
RTN3O95197 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
RTN3O95197 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RTN3O95197 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RTN3O95197 B3GAT3P1-201ENST00000471720 806 ntBASIC20.4■□□□□ 0.86
RTN3O95197 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RTN3O95197 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.4■□□□□ 0.86
RTN3O95197 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.4■□□□□ 0.86
RTN3O95197 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.4■□□□□ 0.86
RTN3O95197 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RTN3O95197 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RTN3O95197 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
RTN3O95197 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
RTN3O95197 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
RTN3O95197 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.39■□□□□ 0.86
RTN3O95197 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
RTN3O95197 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
RTN3O95197 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.39■□□□□ 0.86
RTN3O95197 AC079598.2-202ENST00000546624 1451 ntBASIC20.39■□□□□ 0.85
RTN3O95197 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
RTN3O95197 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
RTN3O95197 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RTN3O95197 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RTN3O95197 MESTP1-201ENST00000404287 994 ntBASIC20.39■□□□□ 0.85
RTN3O95197 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RTN3O95197 AC211429.1-201ENST00000415277 523 ntBASIC20.39■□□□□ 0.85
RTN3O95197 AC087499.1-201ENST00000418141 1075 ntBASIC20.39■□□□□ 0.85
RTN3O95197 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.39■□□□□ 0.85
RTN3O95197 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.39■□□□□ 0.85
RTN3O95197 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RTN3O95197 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.39■□□□□ 0.85
RTN3O95197 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.39■□□□□ 0.85
RTN3O95197 DGCR10-201ENST00000609839 495 ntBASIC20.39■□□□□ 0.85
RTN3O95197 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.39■□□□□ 0.85
RTN3O95197 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.39■□□□□ 0.85
RTN3O95197 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
RTN3O95197 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RTN3O95197 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RTN3O95197 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RTN3O95197 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RTN3O95197 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RTN3O95197 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
RTN3O95197 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RTN3O95197 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
RTN3O95197 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
RTN3O95197 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTN3O95197 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms