Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
LTN1O94822 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
LTN1O94822 AL162377.1-201ENST00000618844 1793 ntBASIC25.8■■□□□ 1.72
LTN1O94822 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
LTN1O94822 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
LTN1O94822 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
LTN1O94822 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
LTN1O94822 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
LTN1O94822 PHB2-202ENST00000440277 996 ntTSL 5 BASIC25.8■■□□□ 1.72
LTN1O94822 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC25.8■■□□□ 1.72
LTN1O94822 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
LTN1O94822 ZNF444P1-201ENST00000559497 298 ntBASIC25.8■■□□□ 1.72
LTN1O94822 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC25.8■■□□□ 1.72
LTN1O94822 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC25.8■■□□□ 1.72
LTN1O94822 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
LTN1O94822 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
LTN1O94822 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
LTN1O94822 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
LTN1O94822 AC007375.3-201ENST00000600936 2314 ntBASIC25.8■■□□□ 1.72
LTN1O94822 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
LTN1O94822 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
LTN1O94822 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
LTN1O94822 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
LTN1O94822 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
LTN1O94822 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC25.79■■□□□ 1.72
LTN1O94822 GABARAPL3-202ENST00000624044 1851 ntBASIC25.79■■□□□ 1.72
LTN1O94822 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC25.79■■□□□ 1.72
LTN1O94822 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
LTN1O94822 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC25.79■■□□□ 1.72
LTN1O94822 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
LTN1O94822 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC25.79■■□□□ 1.72
LTN1O94822 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
LTN1O94822 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
LTN1O94822 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
LTN1O94822 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC25.79■■□□□ 1.72
LTN1O94822 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
LTN1O94822 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
LTN1O94822 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
LTN1O94822 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC25.78■■□□□ 1.72
LTN1O94822 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
LTN1O94822 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
LTN1O94822 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC25.78■■□□□ 1.72
LTN1O94822 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC25.78■■□□□ 1.72
LTN1O94822 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC25.78■■□□□ 1.72
LTN1O94822 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
LTN1O94822 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
LTN1O94822 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
LTN1O94822 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC25.78■■□□□ 1.72
LTN1O94822 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
LTN1O94822 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
LTN1O94822 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC25.78■■□□□ 1.72
LTN1O94822 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
LTN1O94822 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC25.77■■□□□ 1.72
LTN1O94822 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
LTN1O94822 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
LTN1O94822 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
LTN1O94822 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC25.77■■□□□ 1.72
LTN1O94822 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC25.77■■□□□ 1.72
LTN1O94822 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC25.77■■□□□ 1.72
LTN1O94822 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC25.77■■□□□ 1.72
LTN1O94822 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
LTN1O94822 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
LTN1O94822 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
LTN1O94822 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC25.77■■□□□ 1.72
LTN1O94822 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC25.77■■□□□ 1.72
LTN1O94822 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC25.77■■□□□ 1.72
LTN1O94822 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC25.77■■□□□ 1.72
LTN1O94822 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
LTN1O94822 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
LTN1O94822 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.71
LTN1O94822 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC25.76■■□□□ 1.71
LTN1O94822 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC25.76■■□□□ 1.71
LTN1O94822 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
LTN1O94822 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
LTN1O94822 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC25.76■■□□□ 1.71
LTN1O94822 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
LTN1O94822 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
LTN1O94822 AP000523.1-201ENST00000398242 1049 ntBASIC25.76■■□□□ 1.71
LTN1O94822 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC25.76■■□□□ 1.71
LTN1O94822 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC25.76■■□□□ 1.71
LTN1O94822 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
LTN1O94822 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC25.76■■□□□ 1.71
LTN1O94822 AC104417.2-201ENST00000562989 1793 ntBASIC25.76■■□□□ 1.71
LTN1O94822 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC25.76■■□□□ 1.71
LTN1O94822 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
LTN1O94822 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC25.75■■□□□ 1.71
LTN1O94822 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
LTN1O94822 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC25.75■■□□□ 1.71
LTN1O94822 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
LTN1O94822 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
LTN1O94822 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC25.75■■□□□ 1.71
LTN1O94822 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC25.75■■□□□ 1.71
LTN1O94822 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC25.75■■□□□ 1.71
LTN1O94822 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
LTN1O94822 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC25.75■■□□□ 1.71
LTN1O94822 MIR4674-201ENST00000582457 87 ntBASIC25.75■■□□□ 1.71
LTN1O94822 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
LTN1O94822 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
LTN1O94822 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
LTN1O94822 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms