Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
UPK1BO75841 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UPK1BO75841 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UPK1BO75841 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UPK1BO75841 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.92■□□□□ 0.3
UPK1BO75841 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UPK1BO75841 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UPK1BO75841 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.92■□□□□ 0.3
UPK1BO75841 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UPK1BO75841 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UPK1BO75841 BCL2-203ENST00000589955 5011 ntBASIC16.92■□□□□ 0.3
UPK1BO75841 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.92■□□□□ 0.3
UPK1BO75841 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.92■□□□□ 0.3
UPK1BO75841 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UPK1BO75841 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC16.92■□□□□ 0.3
UPK1BO75841 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC16.92■□□□□ 0.3
UPK1BO75841 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC16.92■□□□□ 0.3
UPK1BO75841 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
UPK1BO75841 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UPK1BO75841 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UPK1BO75841 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UPK1BO75841 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
UPK1BO75841 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.92■□□□□ 0.3
UPK1BO75841 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
UPK1BO75841 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UPK1BO75841 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UPK1BO75841 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
UPK1BO75841 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC16.92■□□□□ 0.3
UPK1BO75841 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
UPK1BO75841 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UPK1BO75841 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
UPK1BO75841 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
UPK1BO75841 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.91■□□□□ 0.3
UPK1BO75841 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UPK1BO75841 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
UPK1BO75841 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.91■□□□□ 0.3
UPK1BO75841 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
UPK1BO75841 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UPK1BO75841 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
UPK1BO75841 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UPK1BO75841 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC16.91■□□□□ 0.3
UPK1BO75841 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
UPK1BO75841 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UPK1BO75841 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UPK1BO75841 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
UPK1BO75841 EEF1DP3-203ENST00000566025 782 ntBASIC16.91■□□□□ 0.3
UPK1BO75841 MIR4449-201ENST00000578365 66 ntBASIC16.91■□□□□ 0.3
UPK1BO75841 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UPK1BO75841 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UPK1BO75841 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UPK1BO75841 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.91■□□□□ 0.3
UPK1BO75841 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
UPK1BO75841 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
UPK1BO75841 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UPK1BO75841 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UPK1BO75841 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UPK1BO75841 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
UPK1BO75841 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
UPK1BO75841 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
UPK1BO75841 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.9■□□□□ 0.3
UPK1BO75841 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
UPK1BO75841 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
UPK1BO75841 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UPK1BO75841 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UPK1BO75841 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
UPK1BO75841 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
UPK1BO75841 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC16.9■□□□□ 0.3
UPK1BO75841 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
UPK1BO75841 AC245052.3-201ENST00000450182 901 ntBASIC16.9■□□□□ 0.3
UPK1BO75841 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC16.9■□□□□ 0.3
UPK1BO75841 AC103834.1-201ENST00000520383 144 ntBASIC16.9■□□□□ 0.3
UPK1BO75841 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC16.9■□□□□ 0.3
UPK1BO75841 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.9■□□□□ 0.3
UPK1BO75841 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
UPK1BO75841 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.9■□□□□ 0.3
UPK1BO75841 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
UPK1BO75841 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UPK1BO75841 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.9■□□□□ 0.3
UPK1BO75841 AC134043.2-201ENST00000624206 2238 ntBASIC16.9■□□□□ 0.3
UPK1BO75841 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.9■□□□□ 0.3
UPK1BO75841 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
UPK1BO75841 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UPK1BO75841 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
UPK1BO75841 AC012317.2-201ENST00000623305 2251 ntBASIC16.9■□□□□ 0.3
UPK1BO75841 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UPK1BO75841 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.89■□□□□ 0.3
UPK1BO75841 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.89■□□□□ 0.3
UPK1BO75841 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.3
UPK1BO75841 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UPK1BO75841 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UPK1BO75841 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UPK1BO75841 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
UPK1BO75841 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UPK1BO75841 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UPK1BO75841 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
UPK1BO75841 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
UPK1BO75841 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC16.89■□□□□ 0.29
UPK1BO75841 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
UPK1BO75841 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UPK1BO75841 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms