Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCN2BO60939 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCN2BO60939 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SCN2BO60939 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCN2BO60939 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.38■□□□□ 0.53
SCN2BO60939 AC006970.2-201ENST00000450065 779 ntBASIC18.38■□□□□ 0.53
SCN2BO60939 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.38■□□□□ 0.53
SCN2BO60939 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.38■□□□□ 0.53
SCN2BO60939 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCN2BO60939 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
SCN2BO60939 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.38■□□□□ 0.53
SCN2BO60939 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SCN2BO60939 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCN2BO60939 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SCN2BO60939 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SCN2BO60939 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SCN2BO60939 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SCN2BO60939 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCN2BO60939 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCN2BO60939 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCN2BO60939 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCN2BO60939 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCN2BO60939 AL049812.1-201ENST00000432563 2267 ntBASIC18.37■□□□□ 0.53
SCN2BO60939 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCN2BO60939 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.37■□□□□ 0.53
SCN2BO60939 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SCN2BO60939 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.37■□□□□ 0.53
SCN2BO60939 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.37■□□□□ 0.53
SCN2BO60939 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.37■□□□□ 0.53
SCN2BO60939 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.37■□□□□ 0.53
SCN2BO60939 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.37■□□□□ 0.53
SCN2BO60939 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
SCN2BO60939 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.37■□□□□ 0.53
SCN2BO60939 AC092666.2-201ENST00000613287 246 ntBASIC18.37■□□□□ 0.53
SCN2BO60939 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.37■□□□□ 0.53
SCN2BO60939 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SCN2BO60939 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SCN2BO60939 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCN2BO60939 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCN2BO60939 CROCCP3-202ENST00000420820 1947 ntBASIC18.37■□□□□ 0.53
SCN2BO60939 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCN2BO60939 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.37■□□□□ 0.53
SCN2BO60939 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SCN2BO60939 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCN2BO60939 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCN2BO60939 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCN2BO60939 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCN2BO60939 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCN2BO60939 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SCN2BO60939 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SCN2BO60939 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCN2BO60939 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SCN2BO60939 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.36■□□□□ 0.53
SCN2BO60939 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCN2BO60939 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SCN2BO60939 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.36■□□□□ 0.53
SCN2BO60939 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.36■□□□□ 0.53
SCN2BO60939 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.36■□□□□ 0.53
SCN2BO60939 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.36■□□□□ 0.53
SCN2BO60939 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCN2BO60939 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.36■□□□□ 0.53
SCN2BO60939 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCN2BO60939 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
SCN2BO60939 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.36■□□□□ 0.53
SCN2BO60939 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.36■□□□□ 0.53
SCN2BO60939 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCN2BO60939 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.36■□□□□ 0.53
SCN2BO60939 HLA-B-256ENST00000639848 1089 ntBASIC18.36■□□□□ 0.53
SCN2BO60939 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.36■□□□□ 0.53
SCN2BO60939 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SCN2BO60939 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
SCN2BO60939 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCN2BO60939 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCN2BO60939 AC104417.2-201ENST00000562989 1793 ntBASIC18.35■□□□□ 0.53
SCN2BO60939 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SCN2BO60939 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SCN2BO60939 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCN2BO60939 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCN2BO60939 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
SCN2BO60939 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SCN2BO60939 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SCN2BO60939 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SCN2BO60939 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.35■□□□□ 0.53
SCN2BO60939 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SCN2BO60939 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.35■□□□□ 0.53
SCN2BO60939 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.35■□□□□ 0.53
SCN2BO60939 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.35■□□□□ 0.53
SCN2BO60939 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCN2BO60939 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.35■□□□□ 0.53
SCN2BO60939 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.35■□□□□ 0.53
SCN2BO60939 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SCN2BO60939 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.35■□□□□ 0.53
SCN2BO60939 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCN2BO60939 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SCN2BO60939 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SCN2BO60939 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCN2BO60939 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SCN2BO60939 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
SCN2BO60939 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.35■□□□□ 0.53
SCN2BO60939 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms