Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 LINC01238-205ENST00000567549 1107 ntBASIC19.22■□□□□ 0.67
PCDHGA12O60330 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDHGA12O60330 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
PCDHGA12O60330 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.22■□□□□ 0.67
PCDHGA12O60330 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA12O60330 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA12O60330 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDHGA12O60330 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA12O60330 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA12O60330 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PCDHGA12O60330 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
PCDHGA12O60330 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA12O60330 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA12O60330 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
PCDHGA12O60330 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA12O60330 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
PCDHGA12O60330 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA12O60330 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA12O60330 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA12O60330 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA12O60330 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA12O60330 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA12O60330 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA12O60330 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA12O60330 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.21■□□□□ 0.67
PCDHGA12O60330 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDHGA12O60330 KRT16P6-202ENST00000425692 1426 ntBASIC19.21■□□□□ 0.67
PCDHGA12O60330 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDHGA12O60330 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDHGA12O60330 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA12O60330 FAM87A-204ENST00000613235 858 ntBASIC19.21■□□□□ 0.67
PCDHGA12O60330 AC130371.2-201ENST00000619443 611 ntBASIC19.21■□□□□ 0.67
PCDHGA12O60330 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
PCDHGA12O60330 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA12O60330 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDHGA12O60330 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PCDHGA12O60330 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDHGA12O60330 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA12O60330 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA12O60330 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
PCDHGA12O60330 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA12O60330 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
PCDHGA12O60330 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PCDHGA12O60330 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA12O60330 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PCDHGA12O60330 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA12O60330 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDHGA12O60330 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PCDHGA12O60330 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
PCDHGA12O60330 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.2■□□□□ 0.66
PCDHGA12O60330 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA12O60330 AP000692.2-201ENST00000608391 879 ntBASIC19.2■□□□□ 0.66
PCDHGA12O60330 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA12O60330 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA12O60330 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA12O60330 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA12O60330 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA12O60330 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA12O60330 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDHGA12O60330 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA12O60330 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PCDHGA12O60330 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA12O60330 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA12O60330 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDHGA12O60330 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
PCDHGA12O60330 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA12O60330 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA12O60330 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA12O60330 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDHGA12O60330 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDHGA12O60330 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA12O60330 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA12O60330 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA12O60330 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA12O60330 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDHGA12O60330 AK4P3-201ENST00000418260 669 ntBASIC19.19■□□□□ 0.66
PCDHGA12O60330 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA12O60330 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA12O60330 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.19■□□□□ 0.66
PCDHGA12O60330 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
PCDHGA12O60330 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDHGA12O60330 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA12O60330 FP700111.2-201ENST00000619190 1892 ntBASIC19.19■□□□□ 0.66
PCDHGA12O60330 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDHGA12O60330 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA12O60330 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDHGA12O60330 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDHGA12O60330 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
PCDHGA12O60330 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA12O60330 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
PCDHGA12O60330 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
PCDHGA12O60330 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDHGA12O60330 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA12O60330 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHGA12O60330 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA12O60330 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHGA12O60330 AC018553.1-201ENST00000616682 1458 ntBASIC19.18■□□□□ 0.66
PCDHGA12O60330 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PCDHGA12O60330 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA12O60330 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms