Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PRICKLE3O43900 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRICKLE3O43900 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRICKLE3O43900 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
PRICKLE3O43900 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.65■□□□□ 0.58
PRICKLE3O43900 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.65■□□□□ 0.58
PRICKLE3O43900 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.65■□□□□ 0.58
PRICKLE3O43900 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRICKLE3O43900 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRICKLE3O43900 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PRICKLE3O43900 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.65■□□□□ 0.58
PRICKLE3O43900 Z85996.1-201ENST00000494644 937 ntBASIC18.65■□□□□ 0.58
PRICKLE3O43900 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRICKLE3O43900 AC116562.2-201ENST00000507042 360 ntBASIC18.65■□□□□ 0.58
PRICKLE3O43900 NUDT16P1-203ENST00000513809 620 ntBASIC18.65■□□□□ 0.58
PRICKLE3O43900 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.65■□□□□ 0.58
PRICKLE3O43900 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.65■□□□□ 0.58
PRICKLE3O43900 AL031985.4-201ENST00000642138 673 ntBASIC18.65■□□□□ 0.58
PRICKLE3O43900 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
PRICKLE3O43900 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PRICKLE3O43900 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.65■□□□□ 0.58
PRICKLE3O43900 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRICKLE3O43900 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.65■□□□□ 0.58
PRICKLE3O43900 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PRICKLE3O43900 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
PRICKLE3O43900 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.64■□□□□ 0.58
PRICKLE3O43900 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.64■□□□□ 0.57
PRICKLE3O43900 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.64■□□□□ 0.57
PRICKLE3O43900 MESTP1-201ENST00000404287 994 ntBASIC18.64■□□□□ 0.57
PRICKLE3O43900 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.64■□□□□ 0.57
PRICKLE3O43900 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.64■□□□□ 0.57
PRICKLE3O43900 AC026271.3-201ENST00000571884 352 ntBASIC18.64■□□□□ 0.57
PRICKLE3O43900 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.64■□□□□ 0.57
PRICKLE3O43900 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.64■□□□□ 0.57
PRICKLE3O43900 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.64■□□□□ 0.57
PRICKLE3O43900 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRICKLE3O43900 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRICKLE3O43900 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PRICKLE3O43900 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PRICKLE3O43900 Z82202.1-201ENST00000623446 1880 ntBASIC18.64■□□□□ 0.57
PRICKLE3O43900 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRICKLE3O43900 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRICKLE3O43900 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRICKLE3O43900 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRICKLE3O43900 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PRICKLE3O43900 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
PRICKLE3O43900 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.63■□□□□ 0.57
PRICKLE3O43900 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.63■□□□□ 0.57
PRICKLE3O43900 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRICKLE3O43900 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PRICKLE3O43900 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRICKLE3O43900 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PRICKLE3O43900 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.63■□□□□ 0.57
PRICKLE3O43900 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.63■□□□□ 0.57
PRICKLE3O43900 AC011506.1-201ENST00000474329 610 ntBASIC18.63■□□□□ 0.57
PRICKLE3O43900 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.63■□□□□ 0.57
PRICKLE3O43900 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.63■□□□□ 0.57
PRICKLE3O43900 AC026471.5-201ENST00000615068 467 ntBASIC18.63■□□□□ 0.57
PRICKLE3O43900 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.63■□□□□ 0.57
PRICKLE3O43900 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRICKLE3O43900 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.63■□□□□ 0.57
PRICKLE3O43900 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRICKLE3O43900 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRICKLE3O43900 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRICKLE3O43900 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.63■□□□□ 0.57
PRICKLE3O43900 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
PRICKLE3O43900 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.63■□□□□ 0.57
PRICKLE3O43900 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.62■□□□□ 0.57
PRICKLE3O43900 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.62■□□□□ 0.57
PRICKLE3O43900 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRICKLE3O43900 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.62■□□□□ 0.57
PRICKLE3O43900 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
PRICKLE3O43900 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRICKLE3O43900 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRICKLE3O43900 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRICKLE3O43900 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.62■□□□□ 0.57
PRICKLE3O43900 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.62■□□□□ 0.57
PRICKLE3O43900 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.62■□□□□ 0.57
PRICKLE3O43900 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRICKLE3O43900 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PRICKLE3O43900 KRT8P41-201ENST00000533985 1514 ntBASIC18.62■□□□□ 0.57
PRICKLE3O43900 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PRICKLE3O43900 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRICKLE3O43900 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.62■□□□□ 0.57
PRICKLE3O43900 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PRICKLE3O43900 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRICKLE3O43900 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.62■□□□□ 0.57
PRICKLE3O43900 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PRICKLE3O43900 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PRICKLE3O43900 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRICKLE3O43900 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRICKLE3O43900 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PRICKLE3O43900 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.61■□□□□ 0.57
PRICKLE3O43900 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRICKLE3O43900 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PRICKLE3O43900 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.61■□□□□ 0.57
PRICKLE3O43900 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PRICKLE3O43900 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
PRICKLE3O43900 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PRICKLE3O43900 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms