Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.7■□□□□ 0.74
RIPK2O43353 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
RIPK2O43353 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
RIPK2O43353 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RIPK2O43353 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
RIPK2O43353 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RIPK2O43353 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RIPK2O43353 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.7■□□□□ 0.74
RIPK2O43353 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.7■□□□□ 0.74
RIPK2O43353 AL133373.2-201ENST00000623187 2828 ntBASIC19.7■□□□□ 0.74
RIPK2O43353 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RIPK2O43353 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RIPK2O43353 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RIPK2O43353 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RIPK2O43353 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.69■□□□□ 0.74
RIPK2O43353 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.69■□□□□ 0.74
RIPK2O43353 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RIPK2O43353 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RIPK2O43353 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RIPK2O43353 AL354751.1-201ENST00000412768 1863 ntBASIC19.69■□□□□ 0.74
RIPK2O43353 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.69■□□□□ 0.74
RIPK2O43353 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.69■□□□□ 0.74
RIPK2O43353 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RIPK2O43353 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.69■□□□□ 0.74
RIPK2O43353 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RIPK2O43353 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RIPK2O43353 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.69■□□□□ 0.74
RIPK2O43353 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RIPK2O43353 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RIPK2O43353 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.69■□□□□ 0.74
RIPK2O43353 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.69■□□□□ 0.74
RIPK2O43353 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.69■□□□□ 0.74
RIPK2O43353 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.69■□□□□ 0.74
RIPK2O43353 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RIPK2O43353 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RIPK2O43353 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RIPK2O43353 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RIPK2O43353 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.68■□□□□ 0.74
RIPK2O43353 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RIPK2O43353 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RIPK2O43353 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RIPK2O43353 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RIPK2O43353 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.68■□□□□ 0.74
RIPK2O43353 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RIPK2O43353 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RIPK2O43353 KRT18P11-201ENST00000435214 1283 ntBASIC19.68■□□□□ 0.74
RIPK2O43353 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.68■□□□□ 0.74
RIPK2O43353 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RIPK2O43353 TFP1-202ENST00000475455 1573 ntBASIC19.68■□□□□ 0.74
RIPK2O43353 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RIPK2O43353 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RIPK2O43353 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.68■□□□□ 0.74
RIPK2O43353 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RIPK2O43353 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
RIPK2O43353 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.68■□□□□ 0.74
RIPK2O43353 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.68■□□□□ 0.74
RIPK2O43353 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RIPK2O43353 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RIPK2O43353 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RIPK2O43353 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.68■□□□□ 0.74
RIPK2O43353 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
RIPK2O43353 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RIPK2O43353 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RIPK2O43353 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.67■□□□□ 0.74
RIPK2O43353 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.67■□□□□ 0.74
RIPK2O43353 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.67■□□□□ 0.74
RIPK2O43353 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.67■□□□□ 0.74
RIPK2O43353 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
RIPK2O43353 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.67■□□□□ 0.74
RIPK2O43353 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RIPK2O43353 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RIPK2O43353 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RIPK2O43353 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RIPK2O43353 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RIPK2O43353 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.67■□□□□ 0.74
RIPK2O43353 NTF6G-201ENST00000591094 616 ntBASIC19.67■□□□□ 0.74
RIPK2O43353 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.67■□□□□ 0.74
RIPK2O43353 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RIPK2O43353 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RIPK2O43353 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RIPK2O43353 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RIPK2O43353 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.67■□□□□ 0.74
RIPK2O43353 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.67■□□□□ 0.74
RIPK2O43353 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RIPK2O43353 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
RIPK2O43353 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.67■□□□□ 0.74
RIPK2O43353 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.67■□□□□ 0.74
RIPK2O43353 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RIPK2O43353 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RIPK2O43353 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RIPK2O43353 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
RIPK2O43353 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.66■□□□□ 0.74
RIPK2O43353 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RIPK2O43353 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.66■□□□□ 0.74
RIPK2O43353 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RIPK2O43353 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RIPK2O43353 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RIPK2O43353 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
RIPK2O43353 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
RIPK2O43353 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms