Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN5O00501 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.5■□□□□ 0.87
CLDN5O00501 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CLDN5O00501 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.5■□□□□ 0.87
CLDN5O00501 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
CLDN5O00501 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.5■□□□□ 0.87
CLDN5O00501 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN5O00501 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.49■□□□□ 0.87
CLDN5O00501 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN5O00501 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN5O00501 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN5O00501 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN5O00501 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.49■□□□□ 0.87
CLDN5O00501 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.49■□□□□ 0.87
CLDN5O00501 AL160286.2-201ENST00000567150 934 ntBASIC20.49■□□□□ 0.87
CLDN5O00501 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.49■□□□□ 0.87
CLDN5O00501 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.49■□□□□ 0.87
CLDN5O00501 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN5O00501 RCC2P6-201ENST00000526625 1557 ntBASIC20.49■□□□□ 0.87
CLDN5O00501 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.49■□□□□ 0.87
CLDN5O00501 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.49■□□□□ 0.87
CLDN5O00501 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.49■□□□□ 0.87
CLDN5O00501 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN5O00501 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN5O00501 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.48■□□□□ 0.87
CLDN5O00501 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CLDN5O00501 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLDN5O00501 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLDN5O00501 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLDN5O00501 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.48■□□□□ 0.87
CLDN5O00501 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLDN5O00501 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLDN5O00501 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
CLDN5O00501 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLDN5O00501 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.48■□□□□ 0.87
CLDN5O00501 AC026271.3-201ENST00000571884 352 ntBASIC20.48■□□□□ 0.87
CLDN5O00501 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.48■□□□□ 0.87
CLDN5O00501 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.48■□□□□ 0.87
CLDN5O00501 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLDN5O00501 FSCN1P1-201ENST00000568912 1481 ntBASIC20.48■□□□□ 0.87
CLDN5O00501 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.48■□□□□ 0.87
CLDN5O00501 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
CLDN5O00501 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CLDN5O00501 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.48■□□□□ 0.87
CLDN5O00501 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.48■□□□□ 0.87
CLDN5O00501 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.47■□□□□ 0.87
CLDN5O00501 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLDN5O00501 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLDN5O00501 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.47■□□□□ 0.87
CLDN5O00501 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLDN5O00501 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLDN5O00501 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLDN5O00501 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLDN5O00501 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CLDN5O00501 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLDN5O00501 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.47■□□□□ 0.87
CLDN5O00501 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
CLDN5O00501 AL390955.1-201ENST00000428694 934 ntBASIC20.47■□□□□ 0.87
CLDN5O00501 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.47■□□□□ 0.87
CLDN5O00501 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLDN5O00501 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.47■□□□□ 0.87
CLDN5O00501 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.47■□□□□ 0.87
CLDN5O00501 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CLDN5O00501 AC073912.3-201ENST00000624414 853 ntBASIC20.47■□□□□ 0.87
CLDN5O00501 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.47■□□□□ 0.87
CLDN5O00501 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.47■□□□□ 0.87
CLDN5O00501 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.47■□□□□ 0.87
CLDN5O00501 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CLDN5O00501 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CLDN5O00501 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLDN5O00501 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CLDN5O00501 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLDN5O00501 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLDN5O00501 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLDN5O00501 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLDN5O00501 KRT8P9-201ENST00000558927 1449 ntBASIC20.46■□□□□ 0.87
CLDN5O00501 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CLDN5O00501 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLDN5O00501 UNC93B2-201ENST00000285383 730 ntBASIC20.46■□□□□ 0.87
CLDN5O00501 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CLDN5O00501 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.46■□□□□ 0.87
CLDN5O00501 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLDN5O00501 AC011298.2-201ENST00000617989 482 ntBASIC20.46■□□□□ 0.87
CLDN5O00501 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.46■□□□□ 0.87
CLDN5O00501 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLDN5O00501 AC104417.2-201ENST00000562989 1793 ntBASIC20.46■□□□□ 0.87
CLDN5O00501 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLDN5O00501 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.45■□□□□ 0.87
CLDN5O00501 ZNF815P-204ENST00000434898 1737 ntBASIC20.45■□□□□ 0.86
CLDN5O00501 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CLDN5O00501 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLDN5O00501 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLDN5O00501 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CLDN5O00501 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLDN5O00501 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.45■□□□□ 0.86
CLDN5O00501 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLDN5O00501 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.45■□□□□ 0.86
CLDN5O00501 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLDN5O00501 MIR1238-201ENST00000408483 83 ntBASIC20.45■□□□□ 0.86
CLDN5O00501 AC091390.4-202ENST00000476426 537 ntBASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms