Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
TNFRSF11BO00300 AC008694.1-202ENST00000636953 945 ntBASIC17.93■□□□□ 0.46
TNFRSF11BO00300 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TNFRSF11BO00300 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TNFRSF11BO00300 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TNFRSF11BO00300 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.93■□□□□ 0.46
TNFRSF11BO00300 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TNFRSF11BO00300 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TNFRSF11BO00300 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TNFRSF11BO00300 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TNFRSF11BO00300 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TNFRSF11BO00300 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
TNFRSF11BO00300 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TNFRSF11BO00300 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
TNFRSF11BO00300 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.93■□□□□ 0.46
TNFRSF11BO00300 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TNFRSF11BO00300 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF11BO00300 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF11BO00300 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF11BO00300 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TNFRSF11BO00300 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.92■□□□□ 0.46
TNFRSF11BO00300 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF11BO00300 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF11BO00300 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.92■□□□□ 0.46
TNFRSF11BO00300 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TNFRSF11BO00300 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.92■□□□□ 0.46
TNFRSF11BO00300 AC116351.2-201ENST00000606540 1585 ntBASIC17.92■□□□□ 0.46
TNFRSF11BO00300 AC104581.1-202ENST00000635932 2618 ntBASIC17.92■□□□□ 0.46
TNFRSF11BO00300 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF11BO00300 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.92■□□□□ 0.46
TNFRSF11BO00300 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.92■□□□□ 0.46
TNFRSF11BO00300 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF11BO00300 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF11BO00300 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF11BO00300 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.92■□□□□ 0.46
TNFRSF11BO00300 AC034268.1-201ENST00000441047 882 ntBASIC17.92■□□□□ 0.46
TNFRSF11BO00300 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF11BO00300 DUX4L16-201ENST00000555130 1264 ntBASIC17.92■□□□□ 0.46
TNFRSF11BO00300 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.92■□□□□ 0.46
TNFRSF11BO00300 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
TNFRSF11BO00300 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF11BO00300 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
TNFRSF11BO00300 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.92■□□□□ 0.46
TNFRSF11BO00300 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.92■□□□□ 0.46
TNFRSF11BO00300 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF11BO00300 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF11BO00300 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF11BO00300 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
TNFRSF11BO00300 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF11BO00300 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF11BO00300 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF11BO00300 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF11BO00300 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF11BO00300 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF11BO00300 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.92■□□□□ 0.46
TNFRSF11BO00300 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF11BO00300 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TNFRSF11BO00300 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.91■□□□□ 0.46
TNFRSF11BO00300 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.91■□□□□ 0.46
TNFRSF11BO00300 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNFRSF11BO00300 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TNFRSF11BO00300 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
TNFRSF11BO00300 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
TNFRSF11BO00300 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNFRSF11BO00300 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TNFRSF11BO00300 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNFRSF11BO00300 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNFRSF11BO00300 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
TNFRSF11BO00300 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNFRSF11BO00300 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
TNFRSF11BO00300 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.91■□□□□ 0.46
TNFRSF11BO00300 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.91■□□□□ 0.46
TNFRSF11BO00300 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNFRSF11BO00300 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.91■□□□□ 0.46
TNFRSF11BO00300 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.91■□□□□ 0.46
TNFRSF11BO00300 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.91■□□□□ 0.46
TNFRSF11BO00300 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.91■□□□□ 0.46
TNFRSF11BO00300 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.91■□□□□ 0.46
TNFRSF11BO00300 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNFRSF11BO00300 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNFRSF11BO00300 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNFRSF11BO00300 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TNFRSF11BO00300 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNFRSF11BO00300 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TNFRSF11BO00300 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TNFRSF11BO00300 AC005082.1-201ENST00000413042 2259 ntBASIC17.91■□□□□ 0.46
TNFRSF11BO00300 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNFRSF11BO00300 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TNFRSF11BO00300 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TNFRSF11BO00300 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TNFRSF11BO00300 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
TNFRSF11BO00300 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TNFRSF11BO00300 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.9■□□□□ 0.46
TNFRSF11BO00300 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.9■□□□□ 0.46
TNFRSF11BO00300 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNFRSF11BO00300 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TNFRSF11BO00300 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNFRSF11BO00300 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TNFRSF11BO00300 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
TNFRSF11BO00300 AC026471.1-201ENST00000564629 3026 ntBASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms