Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
DFFAO00273 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DFFAO00273 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.94■□□□□ 0.78
DFFAO00273 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.94■□□□□ 0.78
DFFAO00273 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.94■□□□□ 0.78
DFFAO00273 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
DFFAO00273 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.94■□□□□ 0.78
DFFAO00273 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
DFFAO00273 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
DFFAO00273 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.94■□□□□ 0.78
DFFAO00273 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
DFFAO00273 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.94■□□□□ 0.78
DFFAO00273 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
DFFAO00273 AC116562.4-201ENST00000641316 2276 ntBASIC19.93■□□□□ 0.78
DFFAO00273 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
DFFAO00273 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
DFFAO00273 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.93■□□□□ 0.78
DFFAO00273 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
DFFAO00273 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DFFAO00273 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.93■□□□□ 0.78
DFFAO00273 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
DFFAO00273 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DFFAO00273 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DFFAO00273 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
DFFAO00273 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DFFAO00273 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.93■□□□□ 0.78
DFFAO00273 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.93■□□□□ 0.78
DFFAO00273 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.93■□□□□ 0.78
DFFAO00273 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.93■□□□□ 0.78
DFFAO00273 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.93■□□□□ 0.78
DFFAO00273 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.93■□□□□ 0.78
DFFAO00273 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.93■□□□□ 0.78
DFFAO00273 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DFFAO00273 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.93■□□□□ 0.78
DFFAO00273 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DFFAO00273 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DFFAO00273 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DFFAO00273 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DFFAO00273 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DFFAO00273 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
DFFAO00273 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.93■□□□□ 0.78
DFFAO00273 AC093484.2-201ENST00000580996 2166 ntBASIC19.93■□□□□ 0.78
DFFAO00273 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DFFAO00273 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
DFFAO00273 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DFFAO00273 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.92■□□□□ 0.78
DFFAO00273 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DFFAO00273 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DFFAO00273 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DFFAO00273 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
DFFAO00273 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
DFFAO00273 GCSHP5-201ENST00000443090 522 ntBASIC19.92■□□□□ 0.78
DFFAO00273 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.92■□□□□ 0.78
DFFAO00273 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DFFAO00273 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.92■□□□□ 0.78
DFFAO00273 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.92■□□□□ 0.78
DFFAO00273 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.92■□□□□ 0.78
DFFAO00273 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.92■□□□□ 0.78
DFFAO00273 C1QL1P1-201ENST00000568105 661 ntBASIC19.92■□□□□ 0.78
DFFAO00273 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
DFFAO00273 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
DFFAO00273 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DFFAO00273 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
DFFAO00273 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
DFFAO00273 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.92■□□□□ 0.78
DFFAO00273 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DFFAO00273 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DFFAO00273 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DFFAO00273 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.91■□□□□ 0.78
DFFAO00273 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.91■□□□□ 0.78
DFFAO00273 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.91■□□□□ 0.78
DFFAO00273 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
DFFAO00273 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
DFFAO00273 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DFFAO00273 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.91■□□□□ 0.78
DFFAO00273 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DFFAO00273 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DFFAO00273 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
DFFAO00273 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.91■□□□□ 0.78
DFFAO00273 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
DFFAO00273 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.91■□□□□ 0.78
DFFAO00273 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.91■□□□□ 0.78
DFFAO00273 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.91■□□□□ 0.78
DFFAO00273 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
DFFAO00273 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
DFFAO00273 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.91■□□□□ 0.78
DFFAO00273 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
DFFAO00273 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
DFFAO00273 Z82202.1-201ENST00000623446 1880 ntBASIC19.9■□□□□ 0.78
DFFAO00273 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
DFFAO00273 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.9■□□□□ 0.78
DFFAO00273 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
DFFAO00273 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
DFFAO00273 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.9■□□□□ 0.78
DFFAO00273 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
DFFAO00273 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
DFFAO00273 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.9■□□□□ 0.78
DFFAO00273 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
DFFAO00273 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DFFAO00273 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms