Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
AP3B1O00203 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
AP3B1O00203 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
AP3B1O00203 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
AP3B1O00203 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
AP3B1O00203 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
AP3B1O00203 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
AP3B1O00203 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
AP3B1O00203 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
AP3B1O00203 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
AP3B1O00203 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.58■□□□□ 0.72
AP3B1O00203 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP3B1O00203 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.57■□□□□ 0.72
AP3B1O00203 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP3B1O00203 AC104417.2-201ENST00000562989 1793 ntBASIC19.57■□□□□ 0.72
AP3B1O00203 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.57■□□□□ 0.72
AP3B1O00203 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
AP3B1O00203 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
AP3B1O00203 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP3B1O00203 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP3B1O00203 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP3B1O00203 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP3B1O00203 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP3B1O00203 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
AP3B1O00203 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.57■□□□□ 0.72
AP3B1O00203 UNC93B5-201ENST00000530315 699 ntBASIC19.57■□□□□ 0.72
AP3B1O00203 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.57■□□□□ 0.72
AP3B1O00203 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP3B1O00203 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP3B1O00203 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
AP3B1O00203 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP3B1O00203 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP3B1O00203 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP3B1O00203 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.56■□□□□ 0.72
AP3B1O00203 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP3B1O00203 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
AP3B1O00203 AC098818.2-201ENST00000564925 2320 ntBASIC19.56■□□□□ 0.72
AP3B1O00203 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
AP3B1O00203 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.56■□□□□ 0.72
AP3B1O00203 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.56■□□□□ 0.72
AP3B1O00203 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.56■□□□□ 0.72
AP3B1O00203 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.56■□□□□ 0.72
AP3B1O00203 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
AP3B1O00203 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP3B1O00203 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.56■□□□□ 0.72
AP3B1O00203 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
AP3B1O00203 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP3B1O00203 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP3B1O00203 TNXA-203ENST00000507684 2038 ntBASIC19.56■□□□□ 0.72
AP3B1O00203 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
AP3B1O00203 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.56■□□□□ 0.72
AP3B1O00203 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP3B1O00203 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
AP3B1O00203 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP3B1O00203 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP3B1O00203 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
AP3B1O00203 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.55■□□□□ 0.72
AP3B1O00203 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP3B1O00203 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP3B1O00203 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP3B1O00203 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
AP3B1O00203 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP3B1O00203 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
AP3B1O00203 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP3B1O00203 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
AP3B1O00203 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.55■□□□□ 0.72
AP3B1O00203 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.55■□□□□ 0.72
AP3B1O00203 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
AP3B1O00203 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
AP3B1O00203 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.55■□□□□ 0.72
AP3B1O00203 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.55■□□□□ 0.72
AP3B1O00203 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP3B1O00203 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
AP3B1O00203 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP3B1O00203 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP3B1O00203 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP3B1O00203 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.55■□□□□ 0.72
AP3B1O00203 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP3B1O00203 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP3B1O00203 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
AP3B1O00203 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP3B1O00203 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
AP3B1O00203 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP3B1O00203 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.54■□□□□ 0.72
AP3B1O00203 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
AP3B1O00203 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP3B1O00203 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP3B1O00203 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
AP3B1O00203 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.54■□□□□ 0.72
AP3B1O00203 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
AP3B1O00203 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
AP3B1O00203 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP3B1O00203 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP3B1O00203 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP3B1O00203 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.54■□□□□ 0.72
AP3B1O00203 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
AP3B1O00203 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP3B1O00203 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP3B1O00203 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP3B1O00203 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms