Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRABD2BA6NFA1 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.64■□□□□ 0.57
TRABD2BA6NFA1 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TRABD2BA6NFA1 YBX1P10-201ENST00000444752 975 ntBASIC18.64■□□□□ 0.57
TRABD2BA6NFA1 KRT18P16-201ENST00000510337 1294 ntBASIC18.64■□□□□ 0.57
TRABD2BA6NFA1 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
TRABD2BA6NFA1 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
TRABD2BA6NFA1 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRABD2BA6NFA1 AC096733.2-201ENST00000609937 1394 ntBASIC18.64■□□□□ 0.57
TRABD2BA6NFA1 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TRABD2BA6NFA1 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.64■□□□□ 0.57
TRABD2BA6NFA1 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRABD2BA6NFA1 AC092338.2-201ENST00000568827 1415 ntBASIC18.64■□□□□ 0.57
TRABD2BA6NFA1 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRABD2BA6NFA1 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRABD2BA6NFA1 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
TRABD2BA6NFA1 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TRABD2BA6NFA1 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRABD2BA6NFA1 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRABD2BA6NFA1 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRABD2BA6NFA1 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRABD2BA6NFA1 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TRABD2BA6NFA1 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRABD2BA6NFA1 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRABD2BA6NFA1 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRABD2BA6NFA1 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRABD2BA6NFA1 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TRABD2BA6NFA1 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRABD2BA6NFA1 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRABD2BA6NFA1 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRABD2BA6NFA1 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.63■□□□□ 0.57
TRABD2BA6NFA1 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.63■□□□□ 0.57
TRABD2BA6NFA1 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.63■□□□□ 0.57
TRABD2BA6NFA1 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.63■□□□□ 0.57
TRABD2BA6NFA1 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.63■□□□□ 0.57
TRABD2BA6NFA1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRABD2BA6NFA1 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRABD2BA6NFA1 AL512604.3-201ENST00000569583 964 ntBASIC18.63■□□□□ 0.57
TRABD2BA6NFA1 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRABD2BA6NFA1 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.63■□□□□ 0.57
TRABD2BA6NFA1 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.63■□□□□ 0.57
TRABD2BA6NFA1 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
TRABD2BA6NFA1 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRABD2BA6NFA1 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TRABD2BA6NFA1 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRABD2BA6NFA1 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRABD2BA6NFA1 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.63■□□□□ 0.57
TRABD2BA6NFA1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.63■□□□□ 0.57
TRABD2BA6NFA1 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.63■□□□□ 0.57
TRABD2BA6NFA1 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.63■□□□□ 0.57
TRABD2BA6NFA1 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TRABD2BA6NFA1 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.63■□□□□ 0.57
TRABD2BA6NFA1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRABD2BA6NFA1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRABD2BA6NFA1 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRABD2BA6NFA1 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRABD2BA6NFA1 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRABD2BA6NFA1 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRABD2BA6NFA1 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
TRABD2BA6NFA1 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRABD2BA6NFA1 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TRABD2BA6NFA1 TSPY17P-201ENST00000450329 467 ntBASIC18.62■□□□□ 0.57
TRABD2BA6NFA1 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.62■□□□□ 0.57
TRABD2BA6NFA1 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.62■□□□□ 0.57
TRABD2BA6NFA1 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRABD2BA6NFA1 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.62■□□□□ 0.57
TRABD2BA6NFA1 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TRABD2BA6NFA1 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TRABD2BA6NFA1 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRABD2BA6NFA1 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRABD2BA6NFA1 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRABD2BA6NFA1 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.62■□□□□ 0.57
TRABD2BA6NFA1 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.62■□□□□ 0.57
TRABD2BA6NFA1 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRABD2BA6NFA1 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRABD2BA6NFA1 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRABD2BA6NFA1 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRABD2BA6NFA1 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
TRABD2BA6NFA1 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.62■□□□□ 0.57
TRABD2BA6NFA1 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRABD2BA6NFA1 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRABD2BA6NFA1 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TRABD2BA6NFA1 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TRABD2BA6NFA1 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRABD2BA6NFA1 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.61■□□□□ 0.57
TRABD2BA6NFA1 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.61■□□□□ 0.57
TRABD2BA6NFA1 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRABD2BA6NFA1 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRABD2BA6NFA1 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
TRABD2BA6NFA1 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.61■□□□□ 0.57
TRABD2BA6NFA1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRABD2BA6NFA1 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.61■□□□□ 0.57
TRABD2BA6NFA1 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRABD2BA6NFA1 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRABD2BA6NFA1 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRABD2BA6NFA1 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRABD2BA6NFA1 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRABD2BA6NFA1 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRABD2BA6NFA1 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRABD2BA6NFA1 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms