Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC162PA2VCL2 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC162PA2VCL2 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC162PA2VCL2 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC162PA2VCL2 POU5F1P3-201ENST00000428824 1078 ntBASIC19.39■□□□□ 0.69
CCDC162PA2VCL2 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC162PA2VCL2 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC162PA2VCL2 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC162PA2VCL2 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.39■□□□□ 0.69
CCDC162PA2VCL2 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC162PA2VCL2 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.39■□□□□ 0.69
CCDC162PA2VCL2 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC162PA2VCL2 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC162PA2VCL2 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC162PA2VCL2 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC162PA2VCL2 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
CCDC162PA2VCL2 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC162PA2VCL2 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CCDC162PA2VCL2 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC162PA2VCL2 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC162PA2VCL2 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC162PA2VCL2 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC162PA2VCL2 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC162PA2VCL2 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC162PA2VCL2 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC162PA2VCL2 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC162PA2VCL2 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC162PA2VCL2 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC162PA2VCL2 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CCDC162PA2VCL2 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC162PA2VCL2 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC162PA2VCL2 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC162PA2VCL2 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC162PA2VCL2 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
CCDC162PA2VCL2 KRASP1-201ENST00000407852 552 ntBASIC19.38■□□□□ 0.69
CCDC162PA2VCL2 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.38■□□□□ 0.69
CCDC162PA2VCL2 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC162PA2VCL2 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC162PA2VCL2 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC162PA2VCL2 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC162PA2VCL2 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC162PA2VCL2 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC162PA2VCL2 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC162PA2VCL2 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC162PA2VCL2 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC162PA2VCL2 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC162PA2VCL2 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC162PA2VCL2 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CCDC162PA2VCL2 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC162PA2VCL2 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC162PA2VCL2 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC162PA2VCL2 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC162PA2VCL2 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC162PA2VCL2 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC162PA2VCL2 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC162PA2VCL2 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.37■□□□□ 0.69
CCDC162PA2VCL2 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC162PA2VCL2 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC162PA2VCL2 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC162PA2VCL2 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC162PA2VCL2 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC162PA2VCL2 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.37■□□□□ 0.69
CCDC162PA2VCL2 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC162PA2VCL2 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC162PA2VCL2 AC128676.1-201ENST00000454392 318 ntBASIC19.37■□□□□ 0.69
CCDC162PA2VCL2 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC162PA2VCL2 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.37■□□□□ 0.69
CCDC162PA2VCL2 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
CCDC162PA2VCL2 RN7SL471P-201ENST00000580476 299 ntBASIC19.37■□□□□ 0.69
CCDC162PA2VCL2 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC162PA2VCL2 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC162PA2VCL2 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CCDC162PA2VCL2 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC162PA2VCL2 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC162PA2VCL2 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CCDC162PA2VCL2 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC162PA2VCL2 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC162PA2VCL2 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC162PA2VCL2 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC162PA2VCL2 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC162PA2VCL2 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC162PA2VCL2 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC162PA2VCL2 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC162PA2VCL2 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
CCDC162PA2VCL2 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC162PA2VCL2 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CCDC162PA2VCL2 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC162PA2VCL2 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC162PA2VCL2 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CCDC162PA2VCL2 AC239809.2-201ENST00000415381 517 ntBASIC19.36■□□□□ 0.69
CCDC162PA2VCL2 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
CCDC162PA2VCL2 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC162PA2VCL2 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC162PA2VCL2 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CCDC162PA2VCL2 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC162PA2VCL2 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC162PA2VCL2 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC162PA2VCL2 AC104417.2-201ENST00000562989 1793 ntBASIC19.36■□□□□ 0.69
CCDC162PA2VCL2 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CCDC162PA2VCL2 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms