Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMIM28A0A1B0GU29 KRT18P22-201ENST00000402024 1347 ntBASIC20.83■□□□□ 0.93
SMIM28A0A1B0GU29 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMIM28A0A1B0GU29 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.83■□□□□ 0.93
SMIM28A0A1B0GU29 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMIM28A0A1B0GU29 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMIM28A0A1B0GU29 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
SMIM28A0A1B0GU29 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
SMIM28A0A1B0GU29 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
SMIM28A0A1B0GU29 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.83■□□□□ 0.93
SMIM28A0A1B0GU29 MFAP1P1-201ENST00000442257 1255 ntBASIC20.83■□□□□ 0.93
SMIM28A0A1B0GU29 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.83■□□□□ 0.93
SMIM28A0A1B0GU29 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.83■□□□□ 0.93
SMIM28A0A1B0GU29 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.83■□□□□ 0.93
SMIM28A0A1B0GU29 C2orf69P3-201ENST00000565542 1120 ntBASIC20.83■□□□□ 0.93
SMIM28A0A1B0GU29 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
SMIM28A0A1B0GU29 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
SMIM28A0A1B0GU29 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMIM28A0A1B0GU29 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMIM28A0A1B0GU29 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.83■□□□□ 0.93
SMIM28A0A1B0GU29 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.83■□□□□ 0.92
SMIM28A0A1B0GU29 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SMIM28A0A1B0GU29 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
SMIM28A0A1B0GU29 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SMIM28A0A1B0GU29 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
SMIM28A0A1B0GU29 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMIM28A0A1B0GU29 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMIM28A0A1B0GU29 AC104417.2-201ENST00000562989 1793 ntBASIC20.82■□□□□ 0.92
SMIM28A0A1B0GU29 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SMIM28A0A1B0GU29 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.82■□□□□ 0.92
SMIM28A0A1B0GU29 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMIM28A0A1B0GU29 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.82■□□□□ 0.92
SMIM28A0A1B0GU29 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMIM28A0A1B0GU29 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMIM28A0A1B0GU29 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
SMIM28A0A1B0GU29 TSPY14P-201ENST00000303979 915 ntBASIC20.82■□□□□ 0.92
SMIM28A0A1B0GU29 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.82■□□□□ 0.92
SMIM28A0A1B0GU29 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.82■□□□□ 0.92
SMIM28A0A1B0GU29 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMIM28A0A1B0GU29 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.82■□□□□ 0.92
SMIM28A0A1B0GU29 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SMIM28A0A1B0GU29 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMIM28A0A1B0GU29 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SMIM28A0A1B0GU29 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.82■□□□□ 0.92
SMIM28A0A1B0GU29 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMIM28A0A1B0GU29 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
SMIM28A0A1B0GU29 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMIM28A0A1B0GU29 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SMIM28A0A1B0GU29 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMIM28A0A1B0GU29 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.81■□□□□ 0.92
SMIM28A0A1B0GU29 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMIM28A0A1B0GU29 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.81■□□□□ 0.92
SMIM28A0A1B0GU29 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMIM28A0A1B0GU29 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMIM28A0A1B0GU29 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SMIM28A0A1B0GU29 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.81■□□□□ 0.92
SMIM28A0A1B0GU29 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.81■□□□□ 0.92
SMIM28A0A1B0GU29 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.81■□□□□ 0.92
SMIM28A0A1B0GU29 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.81■□□□□ 0.92
SMIM28A0A1B0GU29 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.81■□□□□ 0.92
SMIM28A0A1B0GU29 EGLN1P1-201ENST00000531623 762 ntBASIC20.81■□□□□ 0.92
SMIM28A0A1B0GU29 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SMIM28A0A1B0GU29 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
SMIM28A0A1B0GU29 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.81■□□□□ 0.92
SMIM28A0A1B0GU29 AC005363.2-201ENST00000618631 242 ntBASIC20.81■□□□□ 0.92
SMIM28A0A1B0GU29 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMIM28A0A1B0GU29 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
SMIM28A0A1B0GU29 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.81■□□□□ 0.92
SMIM28A0A1B0GU29 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMIM28A0A1B0GU29 ZNF815P-204ENST00000434898 1737 ntBASIC20.81■□□□□ 0.92
SMIM28A0A1B0GU29 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMIM28A0A1B0GU29 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMIM28A0A1B0GU29 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SMIM28A0A1B0GU29 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMIM28A0A1B0GU29 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMIM28A0A1B0GU29 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMIM28A0A1B0GU29 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMIM28A0A1B0GU29 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.8■□□□□ 0.92
SMIM28A0A1B0GU29 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMIM28A0A1B0GU29 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.8■□□□□ 0.92
SMIM28A0A1B0GU29 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.8■□□□□ 0.92
SMIM28A0A1B0GU29 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SMIM28A0A1B0GU29 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.8■□□□□ 0.92
SMIM28A0A1B0GU29 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.8■□□□□ 0.92
SMIM28A0A1B0GU29 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.8■□□□□ 0.92
SMIM28A0A1B0GU29 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SMIM28A0A1B0GU29 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.8■□□□□ 0.92
SMIM28A0A1B0GU29 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SMIM28A0A1B0GU29 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMIM28A0A1B0GU29 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMIM28A0A1B0GU29 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.8■□□□□ 0.92
SMIM28A0A1B0GU29 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMIM28A0A1B0GU29 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SMIM28A0A1B0GU29 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.79■□□□□ 0.92
SMIM28A0A1B0GU29 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SMIM28A0A1B0GU29 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SMIM28A0A1B0GU29 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMIM28A0A1B0GU29 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SMIM28A0A1B0GU29 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SMIM28A0A1B0GU29 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms