Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 ARL16-211ENST00000576135 694 ntTSL 3 BASIC14.02□□□□□ -0.17
IGHV4-28A0A0C4DH34 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC14.02□□□□□ -0.17
IGHV4-28A0A0C4DH34 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC14.02□□□□□ -0.17
IGHV4-28A0A0C4DH34 SNX21-213ENST00000614929 587 ntTSL 5 BASIC14.02□□□□□ -0.17
IGHV4-28A0A0C4DH34 AL031985.4-201ENST00000642138 673 ntBASIC14.02□□□□□ -0.17
IGHV4-28A0A0C4DH34 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
IGHV4-28A0A0C4DH34 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
IGHV4-28A0A0C4DH34 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
IGHV4-28A0A0C4DH34 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
IGHV4-28A0A0C4DH34 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
IGHV4-28A0A0C4DH34 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC14.02□□□□□ -0.17
IGHV4-28A0A0C4DH34 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
IGHV4-28A0A0C4DH34 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
IGHV4-28A0A0C4DH34 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
IGHV4-28A0A0C4DH34 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
IGHV4-28A0A0C4DH34 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC14.02□□□□□ -0.17
IGHV4-28A0A0C4DH34 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC14.01□□□□□ -0.17
IGHV4-28A0A0C4DH34 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV4-28A0A0C4DH34 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
IGHV4-28A0A0C4DH34 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV4-28A0A0C4DH34 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV4-28A0A0C4DH34 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC14.01□□□□□ -0.17
IGHV4-28A0A0C4DH34 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV4-28A0A0C4DH34 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
IGHV4-28A0A0C4DH34 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV4-28A0A0C4DH34 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC14.01□□□□□ -0.17
IGHV4-28A0A0C4DH34 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV4-28A0A0C4DH34 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV4-28A0A0C4DH34 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV4-28A0A0C4DH34 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV4-28A0A0C4DH34 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV4-28A0A0C4DH34 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC14.01□□□□□ -0.17
IGHV4-28A0A0C4DH34 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
IGHV4-28A0A0C4DH34 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV4-28A0A0C4DH34 TSPY15P-201ENST00000457163 923 ntBASIC14.01□□□□□ -0.17
IGHV4-28A0A0C4DH34 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV4-28A0A0C4DH34 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC14.01□□□□□ -0.17
IGHV4-28A0A0C4DH34 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC14.01□□□□□ -0.17
IGHV4-28A0A0C4DH34 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV4-28A0A0C4DH34 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC14.01□□□□□ -0.17
IGHV4-28A0A0C4DH34 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
IGHV4-28A0A0C4DH34 BX088651.1-201ENST00000540551 451 ntBASIC14.01□□□□□ -0.17
IGHV4-28A0A0C4DH34 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC14.01□□□□□ -0.17
IGHV4-28A0A0C4DH34 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV4-28A0A0C4DH34 AC131212.4-201ENST00000623606 975 ntBASIC14.01□□□□□ -0.17
IGHV4-28A0A0C4DH34 AC073912.3-201ENST00000624414 853 ntBASIC14.01□□□□□ -0.17
IGHV4-28A0A0C4DH34 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC14.01□□□□□ -0.17
IGHV4-28A0A0C4DH34 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV4-28A0A0C4DH34 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV4-28A0A0C4DH34 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC14.01□□□□□ -0.17
IGHV4-28A0A0C4DH34 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV4-28A0A0C4DH34 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
IGHV4-28A0A0C4DH34 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC14.01□□□□□ -0.17
IGHV4-28A0A0C4DH34 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV4-28A0A0C4DH34 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC14.01□□□□□ -0.17
IGHV4-28A0A0C4DH34 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV4-28A0A0C4DH34 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
IGHV4-28A0A0C4DH34 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC14□□□□□ -0.17
IGHV4-28A0A0C4DH34 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IGHV4-28A0A0C4DH34 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
IGHV4-28A0A0C4DH34 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IGHV4-28A0A0C4DH34 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC14□□□□□ -0.17
IGHV4-28A0A0C4DH34 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IGHV4-28A0A0C4DH34 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC14□□□□□ -0.17
IGHV4-28A0A0C4DH34 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IGHV4-28A0A0C4DH34 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
IGHV4-28A0A0C4DH34 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
IGHV4-28A0A0C4DH34 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC14□□□□□ -0.17
IGHV4-28A0A0C4DH34 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC14□□□□□ -0.17
IGHV4-28A0A0C4DH34 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IGHV4-28A0A0C4DH34 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IGHV4-28A0A0C4DH34 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
IGHV4-28A0A0C4DH34 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IGHV4-28A0A0C4DH34 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC14□□□□□ -0.17
IGHV4-28A0A0C4DH34 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC14□□□□□ -0.17
IGHV4-28A0A0C4DH34 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC14□□□□□ -0.17
IGHV4-28A0A0C4DH34 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IGHV4-28A0A0C4DH34 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC14□□□□□ -0.17
IGHV4-28A0A0C4DH34 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC14□□□□□ -0.17
IGHV4-28A0A0C4DH34 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
IGHV4-28A0A0C4DH34 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC14□□□□□ -0.17
IGHV4-28A0A0C4DH34 REXO1L10P-201ENST00000615707 1290 ntBASIC14□□□□□ -0.17
IGHV4-28A0A0C4DH34 REXO1L12P-201ENST00000622156 912 ntBASIC14□□□□□ -0.17
IGHV4-28A0A0C4DH34 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC14□□□□□ -0.17
IGHV4-28A0A0C4DH34 HLA-A-209ENST00000638375 975 ntBASIC14□□□□□ -0.17
IGHV4-28A0A0C4DH34 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IGHV4-28A0A0C4DH34 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
IGHV4-28A0A0C4DH34 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IGHV4-28A0A0C4DH34 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
IGHV4-28A0A0C4DH34 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IGHV4-28A0A0C4DH34 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IGHV4-28A0A0C4DH34 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IGHV4-28A0A0C4DH34 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
IGHV4-28A0A0C4DH34 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
IGHV4-28A0A0C4DH34 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
IGHV4-28A0A0C4DH34 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IGHV4-28A0A0C4DH34 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
IGHV4-28A0A0C4DH34 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
IGHV4-28A0A0C4DH34 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
IGHV4-28A0A0C4DH34 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms