Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.14■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 CD99P1-205ENST00000527459 561 ntBASIC17.14■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.14■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.14■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.14■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.14■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.13■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.13■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.13■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.13■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.13■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.13■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 AC073648.6-201ENST00000641589 218 ntBASIC17.13■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.13■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.13■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.13■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.13■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 AL049812.1-201ENST00000432563 2267 ntBASIC17.13■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.13■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.12■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.12■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.12■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.12■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.12■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.12■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.12■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.12■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 AL161938.1-201ENST00000569833 2180 ntBASIC17.12■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 AC141586.3-201ENST00000562166 1838 ntBASIC17.12■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.11■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.11■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.11■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.11■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.11■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.11■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.11■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 AC006058.3-201ENST00000606217 1069 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms