Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV6-8A0A0A6YYG3 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV6-8A0A0A6YYG3 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC13.49□□□□□ -0.25
TRBV6-8A0A0A6YYG3 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
TRBV6-8A0A0A6YYG3 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV6-8A0A0A6YYG3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV6-8A0A0A6YYG3 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV6-8A0A0A6YYG3 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
TRBV6-8A0A0A6YYG3 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC13.49□□□□□ -0.25
TRBV6-8A0A0A6YYG3 YBX1P10-201ENST00000444752 975 ntBASIC13.49□□□□□ -0.25
TRBV6-8A0A0A6YYG3 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC13.49□□□□□ -0.25
TRBV6-8A0A0A6YYG3 AL138781.1-201ENST00000566567 1274 ntBASIC13.49□□□□□ -0.25
TRBV6-8A0A0A6YYG3 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC13.49□□□□□ -0.25
TRBV6-8A0A0A6YYG3 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC13.49□□□□□ -0.25
TRBV6-8A0A0A6YYG3 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV6-8A0A0A6YYG3 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV6-8A0A0A6YYG3 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC13.49□□□□□ -0.25
TRBV6-8A0A0A6YYG3 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC13.49□□□□□ -0.25
TRBV6-8A0A0A6YYG3 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV6-8A0A0A6YYG3 ZNF815P-204ENST00000434898 1737 ntBASIC13.49□□□□□ -0.25
TRBV6-8A0A0A6YYG3 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
TRBV6-8A0A0A6YYG3 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV6-8A0A0A6YYG3 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV6-8A0A0A6YYG3 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
TRBV6-8A0A0A6YYG3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC13.49□□□□□ -0.25
TRBV6-8A0A0A6YYG3 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV6-8A0A0A6YYG3 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV6-8A0A0A6YYG3 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-8A0A0A6YYG3 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-8A0A0A6YYG3 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-8A0A0A6YYG3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-8A0A0A6YYG3 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
TRBV6-8A0A0A6YYG3 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-8A0A0A6YYG3 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
TRBV6-8A0A0A6YYG3 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-8A0A0A6YYG3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC13.48□□□□□ -0.25
TRBV6-8A0A0A6YYG3 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-8A0A0A6YYG3 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-8A0A0A6YYG3 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC13.48□□□□□ -0.25
TRBV6-8A0A0A6YYG3 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-8A0A0A6YYG3 NME1-207ENST00000480143 964 ntTSL 2 BASIC13.48□□□□□ -0.25
TRBV6-8A0A0A6YYG3 GXYLT1P5-201ENST00000614548 1189 ntBASIC13.48□□□□□ -0.25
TRBV6-8A0A0A6YYG3 AL109923.1-201ENST00000618799 583 ntBASIC13.48□□□□□ -0.25
TRBV6-8A0A0A6YYG3 AC133041.1-202ENST00000642053 222 ntBASIC13.48□□□□□ -0.25
TRBV6-8A0A0A6YYG3 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-8A0A0A6YYG3 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-8A0A0A6YYG3 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-8A0A0A6YYG3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-8A0A0A6YYG3 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-8A0A0A6YYG3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-8A0A0A6YYG3 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
TRBV6-8A0A0A6YYG3 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-8A0A0A6YYG3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-8A0A0A6YYG3 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV6-8A0A0A6YYG3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC13.48□□□□□ -0.25
TRBV6-8A0A0A6YYG3 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
TRBV6-8A0A0A6YYG3 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC13.47□□□□□ -0.25
TRBV6-8A0A0A6YYG3 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-8A0A0A6YYG3 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
TRBV6-8A0A0A6YYG3 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
TRBV6-8A0A0A6YYG3 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-8A0A0A6YYG3 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-8A0A0A6YYG3 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-8A0A0A6YYG3 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-8A0A0A6YYG3 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC13.47□□□□□ -0.25
TRBV6-8A0A0A6YYG3 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-8A0A0A6YYG3 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-8A0A0A6YYG3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-8A0A0A6YYG3 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-8A0A0A6YYG3 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC13.47□□□□□ -0.25
TRBV6-8A0A0A6YYG3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC13.47□□□□□ -0.25
TRBV6-8A0A0A6YYG3 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC13.47□□□□□ -0.25
TRBV6-8A0A0A6YYG3 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC13.47□□□□□ -0.25
TRBV6-8A0A0A6YYG3 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC13.47□□□□□ -0.25
TRBV6-8A0A0A6YYG3 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC13.47□□□□□ -0.25
TRBV6-8A0A0A6YYG3 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC13.47□□□□□ -0.25
TRBV6-8A0A0A6YYG3 AC120498.8-201ENST00000614275 531 ntBASIC13.47□□□□□ -0.25
TRBV6-8A0A0A6YYG3 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-8A0A0A6YYG3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-8A0A0A6YYG3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-8A0A0A6YYG3 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-8A0A0A6YYG3 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-8A0A0A6YYG3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
TRBV6-8A0A0A6YYG3 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-8A0A0A6YYG3 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-8A0A0A6YYG3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
TRBV6-8A0A0A6YYG3 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC13.47□□□□□ -0.25
TRBV6-8A0A0A6YYG3 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-8A0A0A6YYG3 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-8A0A0A6YYG3 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-8A0A0A6YYG3 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-8A0A0A6YYG3 KRT8P8-201ENST00000434750 1448 ntBASIC13.47□□□□□ -0.25
TRBV6-8A0A0A6YYG3 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV6-8A0A0A6YYG3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
TRBV6-8A0A0A6YYG3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
TRBV6-8A0A0A6YYG3 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRBV6-8A0A0A6YYG3 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
TRBV6-8A0A0A6YYG3 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRBV6-8A0A0A6YYG3 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRBV6-8A0A0A6YYG3 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms