Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 AL672167.1-203ENST00000641299 2975 ntBASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ATG4AQ8WYN0 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 AP000776.1-201ENST00000530032 1663 ntBASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 AC126323.6-202ENST00000568092 3511 ntBASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 RN7SKP162-201ENST00000363605 345 ntBASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 RNU4-24P-201ENST00000364565 139 ntBASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 OR1L1-202ENST00000373686 1083 ntBASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 AL590084.2-201ENST00000401481 382 ntBASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 NPM1P4-201ENST00000414095 812 ntBASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 AC098592.1-201ENST00000419352 333 ntBASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 AC007435.1-201ENST00000421086 415 ntBASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 AC004074.1-201ENST00000421810 1063 ntBASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 AL139421.1-201ENST00000423010 169 ntBASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 CKS1BP6-201ENST00000424932 240 ntBASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 MTND1P20-201ENST00000430341 950 ntBASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 AL354941.1-201ENST00000438600 464 ntBASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 MTCYBP34-201ENST00000439552 670 ntBASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 MTND3P1-201ENST00000441336 220 ntBASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 AL354714.3-201ENST00000447284 493 ntBASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 AC018638.3-201ENST00000461273 132 ntBASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 AC092754.2-201ENST00000463506 460 ntBASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 TRBV8-2-201ENST00000475637 270 ntBASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 AC116353.3-201ENST00000511215 249 ntBASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 AC008837.2-201ENST00000513076 418 ntBASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 BX510359.5-201ENST00000515651 304 ntBASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 IGKV2D-10-201ENST00000520194 281 ntBASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 IGKV3D-34-201ENST00000522638 302 ntBASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 BNIP3P26-201ENST00000600827 554 ntBASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 AC095055.1-201ENST00000603472 1113 ntBASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 OR2AS2P-201ENST00000606902 342 ntBASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 AC135507.1-201ENST00000607214 561 ntBASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 AL049767.1-202ENST00000637826 242 ntBASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 MRRFP1-201ENST00000435941 1675 ntBASIC5.12□□□□□ -1.59
ATG4AQ8WYN0 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 AC008549.2-201ENST00000333482 706 ntBASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 RN7SKP160-201ENST00000363804 340 ntBASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 RNU6-304P-201ENST00000364855 107 ntBASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 RNU6-757P-201ENST00000410334 100 ntBASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 BTF3L4P1-201ENST00000413813 468 ntBASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 PAICSP7-201ENST00000419829 962 ntBASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 RGS17P1-201ENST00000423358 553 ntBASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 GTF2IP23-201ENST00000423746 351 ntBASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 AL121776.1-201ENST00000429337 372 ntBASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 USP9YP31-201ENST00000431405 881 ntBASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 RPL34P6-201ENST00000432390 345 ntBASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 CYCSP11-201ENST00000436426 315 ntBASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 RHOT1P3-201ENST00000436571 331 ntBASIC5.11□□□□□ -1.59
ATG4AQ8WYN0 HMGB1P16-201ENST00000447155 540 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms