Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.97□□□□□ -1.61
SUMO3P55854 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.97□□□□□ -1.61
SUMO3P55854 OR5BR1P-201ENST00000524992 1330 ntBASIC4.97□□□□□ -1.61
SUMO3P55854 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SUMO3P55854 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SUMO3P55854 AC007529.1-201ENST00000418574 2178 ntBASIC4.97□□□□□ -1.61
SUMO3P55854 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
SUMO3P55854 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
SUMO3P55854 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
SUMO3P55854 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SUMO3P55854 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.96□□□□□ -1.62
SUMO3P55854 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SUMO3P55854 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.96□□□□□ -1.62
SUMO3P55854 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
SUMO3P55854 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
SUMO3P55854 AC100757.1-201ENST00000616872 1835 ntBASIC4.96□□□□□ -1.62
SUMO3P55854 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC4.96□□□□□ -1.62
SUMO3P55854 OR4A15-201ENST00000314706 1035 ntBASIC4.96□□□□□ -1.62
SUMO3P55854 SNORA70.6-201ENST00000383934 134 ntBASIC4.96□□□□□ -1.62
SUMO3P55854 RNU6-441P-201ENST00000384545 106 ntBASIC4.96□□□□□ -1.62
SUMO3P55854 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.96□□□□□ -1.62
SUMO3P55854 RNU2-28P-201ENST00000410457 189 ntBASIC4.96□□□□□ -1.62
SUMO3P55854 RN7SKP182-201ENST00000410772 298 ntBASIC4.96□□□□□ -1.62
SUMO3P55854 AC073264.1-201ENST00000411508 416 ntBASIC4.96□□□□□ -1.62
SUMO3P55854 USP9YP33-201ENST00000412220 421 ntBASIC4.96□□□□□ -1.62
SUMO3P55854 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.96□□□□□ -1.62
SUMO3P55854 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.96□□□□□ -1.62
SUMO3P55854 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SUMO3P55854 AC098826.1-201ENST00000433943 471 ntBASIC4.96□□□□□ -1.62
SUMO3P55854 USP9YP35-201ENST00000435696 412 ntBASIC4.96□□□□□ -1.62
SUMO3P55854 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SUMO3P55854 MTCYBP39-201ENST00000437562 491 ntBASIC4.96□□□□□ -1.62
SUMO3P55854 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.96□□□□□ -1.62
SUMO3P55854 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.96□□□□□ -1.62
SUMO3P55854 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.96□□□□□ -1.62
SUMO3P55854 MED28P3-201ENST00000444288 531 ntBASIC4.96□□□□□ -1.62
SUMO3P55854 MTCO1P48-201ENST00000448024 1096 ntBASIC4.96□□□□□ -1.62
SUMO3P55854 RPL23AP35-201ENST00000451906 501 ntBASIC4.96□□□□□ -1.62
SUMO3P55854 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.96□□□□□ -1.62
SUMO3P55854 SETP20-201ENST00000457046 852 ntBASIC4.96□□□□□ -1.62
SUMO3P55854 AC023141.9-201ENST00000458734 412 ntBASIC4.96□□□□□ -1.62
SUMO3P55854 AC100832.1-201ENST00000471945 383 ntBASIC4.96□□□□□ -1.62
SUMO3P55854 AC010301.1-201ENST00000473936 355 ntBASIC4.96□□□□□ -1.62
SUMO3P55854 RN7SL447P-201ENST00000494711 245 ntBASIC4.96□□□□□ -1.62
SUMO3P55854 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.96□□□□□ -1.62
SUMO3P55854 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SUMO3P55854 AC117532.1-201ENST00000514638 323 ntBASIC4.96□□□□□ -1.62
SUMO3P55854 RNY4P37-201ENST00000516225 96 ntBASIC4.96□□□□□ -1.62
SUMO3P55854 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.96□□□□□ -1.62
SUMO3P55854 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.96□□□□□ -1.62
SUMO3P55854 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
SUMO3P55854 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.96□□□□□ -1.62
SUMO3P55854 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.96□□□□□ -1.62
SUMO3P55854 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.96□□□□□ -1.62
SUMO3P55854 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SUMO3P55854 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.96□□□□□ -1.62
SUMO3P55854 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.96□□□□□ -1.62
SUMO3P55854 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.96□□□□□ -1.62
SUMO3P55854 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.96□□□□□ -1.62
SUMO3P55854 AC005341.1-201ENST00000571086 708 ntBASIC4.96□□□□□ -1.62
SUMO3P55854 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.96□□□□□ -1.62
SUMO3P55854 RN7SL356P-201ENST00000582228 248 ntBASIC4.96□□□□□ -1.62
SUMO3P55854 SNORD39.3-201ENST00000584451 71 ntBASIC4.96□□□□□ -1.62
SUMO3P55854 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.96□□□□□ -1.62
SUMO3P55854 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.96□□□□□ -1.62
SUMO3P55854 MIR8080-201ENST00000622224 89 ntBASIC4.96□□□□□ -1.62
SUMO3P55854 AC139792.2-201ENST00000624218 587 ntBASIC4.96□□□□□ -1.62
SUMO3P55854 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.96□□□□□ -1.62
SUMO3P55854 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SUMO3P55854 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
SUMO3P55854 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SUMO3P55854 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SUMO3P55854 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SUMO3P55854 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SUMO3P55854 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SUMO3P55854 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.96□□□□□ -1.62
SUMO3P55854 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
SUMO3P55854 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SUMO3P55854 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.62
SUMO3P55854 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.96□□□□□ -1.62
SUMO3P55854 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SUMO3P55854 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
SUMO3P55854 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC4.95□□□□□ -1.62
SUMO3P55854 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SUMO3P55854 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
SUMO3P55854 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
SUMO3P55854 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SUMO3P55854 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
SUMO3P55854 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.95□□□□□ -1.62
SUMO3P55854 RNA5SP234-201ENST00000363916 119 ntBASIC4.95□□□□□ -1.62
SUMO3P55854 RNA5SP435-201ENST00000364044 108 ntBASIC4.95□□□□□ -1.62
SUMO3P55854 RNU1-85P-201ENST00000364127 164 ntBASIC4.95□□□□□ -1.62
SUMO3P55854 RN7SKP81-201ENST00000365603 331 ntBASIC4.95□□□□□ -1.62
SUMO3P55854 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.95□□□□□ -1.62
SUMO3P55854 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SUMO3P55854 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SUMO3P55854 RNU6-1293P-201ENST00000384077 107 ntBASIC4.95□□□□□ -1.62
SUMO3P55854 RNU6-921P-201ENST00000384361 107 ntBASIC4.95□□□□□ -1.62
SUMO3P55854 Y_RNA.560-201ENST00000384689 102 ntBASIC4.95□□□□□ -1.62
SUMO3P55854 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms