Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.56□□□□□ -1.84
TRAV27A0A087WT01 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.55□□□□□ -1.84
TRAV27A0A087WT01 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
TRAV27A0A087WT01 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TRAV27A0A087WT01 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.55□□□□□ -1.84
TRAV27A0A087WT01 AC017007.4-201ENST00000503353 1352 ntBASIC3.55□□□□□ -1.84
TRAV27A0A087WT01 RNA5SP322-201ENST00000363617 119 ntBASIC3.55□□□□□ -1.84
TRAV27A0A087WT01 RNU1-32P-201ENST00000363937 159 ntBASIC3.55□□□□□ -1.84
TRAV27A0A087WT01 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.55□□□□□ -1.84
TRAV27A0A087WT01 RN7SKP56-201ENST00000410513 331 ntBASIC3.55□□□□□ -1.84
TRAV27A0A087WT01 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.55□□□□□ -1.84
TRAV27A0A087WT01 RPL18P10-201ENST00000425606 538 ntBASIC3.55□□□□□ -1.84
TRAV27A0A087WT01 AC234779.1-201ENST00000425910 285 ntBASIC3.55□□□□□ -1.84
TRAV27A0A087WT01 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.55□□□□□ -1.84
TRAV27A0A087WT01 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.55□□□□□ -1.84
TRAV27A0A087WT01 AL356276.2-201ENST00000435919 558 ntBASIC3.55□□□□□ -1.84
TRAV27A0A087WT01 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC3.55□□□□□ -1.84
TRAV27A0A087WT01 NUTF2P3-201ENST00000448540 384 ntBASIC3.55□□□□□ -1.84
TRAV27A0A087WT01 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TRAV27A0A087WT01 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.55□□□□□ -1.84
TRAV27A0A087WT01 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.55□□□□□ -1.84
TRAV27A0A087WT01 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC3.55□□□□□ -1.84
TRAV27A0A087WT01 AC091516.1-201ENST00000549191 703 ntBASIC3.55□□□□□ -1.84
TRAV27A0A087WT01 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TRAV27A0A087WT01 AC023575.1-201ENST00000580510 358 ntBASIC3.55□□□□□ -1.84
TRAV27A0A087WT01 KPNA2P3-201ENST00000584190 848 ntBASIC3.55□□□□□ -1.84
TRAV27A0A087WT01 MIR6820-201ENST00000611508 62 ntBASIC3.55□□□□□ -1.84
TRAV27A0A087WT01 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.55□□□□□ -1.84
TRAV27A0A087WT01 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.55□□□□□ -1.84
TRAV27A0A087WT01 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.55□□□□□ -1.84
TRAV27A0A087WT01 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.55□□□□□ -1.84
TRAV27A0A087WT01 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TRAV27A0A087WT01 AC006504.1-201ENST00000562493 3666 ntBASIC3.55□□□□□ -1.84
TRAV27A0A087WT01 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.55□□□□□ -1.84
TRAV27A0A087WT01 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC3.55□□□□□ -1.84
TRAV27A0A087WT01 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
TRAV27A0A087WT01 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TRAV27A0A087WT01 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TRAV27A0A087WT01 HSPA8P17-201ENST00000427029 1382 ntBASIC3.54□□□□□ -1.84
TRAV27A0A087WT01 CASC19-255ENST00000641733 1385 ntBASIC3.54□□□□□ -1.84
TRAV27A0A087WT01 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TRAV27A0A087WT01 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TRAV27A0A087WT01 RNA5SP130-201ENST00000364431 114 ntBASIC3.54□□□□□ -1.84
TRAV27A0A087WT01 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TRAV27A0A087WT01 MIR708-201ENST00000390708 88 ntBASIC3.54□□□□□ -1.84
TRAV27A0A087WT01 ENSAP1-201ENST00000392855 326 ntBASIC3.54□□□□□ -1.84
TRAV27A0A087WT01 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.54□□□□□ -1.84
TRAV27A0A087WT01 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC3.54□□□□□ -1.84
TRAV27A0A087WT01 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.54□□□□□ -1.84
TRAV27A0A087WT01 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TRAV27A0A087WT01 BTF3L4P4-201ENST00000506381 449 ntBASIC3.54□□□□□ -1.84
TRAV27A0A087WT01 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.54□□□□□ -1.84
TRAV27A0A087WT01 RNA5SP179-201ENST00000517284 121 ntBASIC3.54□□□□□ -1.84
TRAV27A0A087WT01 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TRAV27A0A087WT01 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.54□□□□□ -1.84
TRAV27A0A087WT01 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.54□□□□□ -1.84
TRAV27A0A087WT01 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.54□□□□□ -1.84
TRAV27A0A087WT01 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.54□□□□□ -1.84
TRAV27A0A087WT01 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.54□□□□□ -1.84
TRAV27A0A087WT01 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.54□□□□□ -1.84
TRAV27A0A087WT01 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.54□□□□□ -1.84
TRAV27A0A087WT01 AC091167.4-201ENST00000605079 184 ntBASIC3.54□□□□□ -1.84
TRAV27A0A087WT01 AL139089.1-201ENST00000620372 975 ntBASIC3.54□□□□□ -1.84
TRAV27A0A087WT01 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.54□□□□□ -1.84
TRAV27A0A087WT01 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
TRAV27A0A087WT01 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TRAV27A0A087WT01 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TRAV27A0A087WT01 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
TRAV27A0A087WT01 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TRAV27A0A087WT01 ASNSP1-201ENST00000518311 1939 ntBASIC3.54□□□□□ -1.84
TRAV27A0A087WT01 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.54□□□□□ -1.84
TRAV27A0A087WT01 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.54□□□□□ -1.84
TRAV27A0A087WT01 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TRAV27A0A087WT01 AP002001.2-201ENST00000529025 1469 ntBASIC3.54□□□□□ -1.84
TRAV27A0A087WT01 NCAPGP1-201ENST00000505112 1814 ntBASIC3.54□□□□□ -1.84
TRAV27A0A087WT01 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
TRAV27A0A087WT01 AC083899.2-201ENST00000423285 1376 ntBASIC3.53□□□□□ -1.84
TRAV27A0A087WT01 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
TRAV27A0A087WT01 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TRAV27A0A087WT01 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TRAV27A0A087WT01 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.53□□□□□ -1.84
TRAV27A0A087WT01 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TRAV27A0A087WT01 RNU6-984P-201ENST00000363236 109 ntBASIC3.53□□□□□ -1.84
TRAV27A0A087WT01 GCNT6-201ENST00000379591 934 ntBASIC3.53□□□□□ -1.84
TRAV27A0A087WT01 MIR937-201ENST00000401271 86 ntBASIC3.53□□□□□ -1.84
TRAV27A0A087WT01 RNU4-6P-201ENST00000410804 122 ntBASIC3.53□□□□□ -1.84
TRAV27A0A087WT01 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.53□□□□□ -1.84
TRAV27A0A087WT01 RPS12P5-201ENST00000423449 371 ntBASIC3.53□□□□□ -1.84
TRAV27A0A087WT01 AC115285.1-201ENST00000424879 736 ntBASIC3.53□□□□□ -1.84
TRAV27A0A087WT01 AL691449.1-201ENST00000426570 421 ntBASIC3.53□□□□□ -1.84
TRAV27A0A087WT01 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.53□□□□□ -1.84
TRAV27A0A087WT01 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC3.53□□□□□ -1.84
TRAV27A0A087WT01 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.53□□□□□ -1.84
TRAV27A0A087WT01 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.53□□□□□ -1.84
TRAV27A0A087WT01 SBDSP1-204ENST00000453858 737 ntBASIC3.53□□□□□ -1.84
TRAV27A0A087WT01 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.53□□□□□ -1.84
TRAV27A0A087WT01 APOOP2-201ENST00000461561 539 ntBASIC3.53□□□□□ -1.84
TRAV27A0A087WT01 AC004069.2-201ENST00000505438 1114 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms