RNA–Protein interactions for RNA: ENST00000410804.1

RNU4-6P-201, Transcript of RNA, U4 small nuclear 6, pseudogene, humanhuman

BASIC

Gene RNU4-6P, Length 122 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-6P-201ENST00000410804 AEBP2Q6ZN18 517 aaPredicted RBP19.22■□□□□ 0.67
RNU4-6P-201ENST00000410804 CHIC1Q5VXU3 224 aa18.27■□□□□ 0.52
RNU4-6P-201ENST00000410804 SENP3Q9H4L4 574 aaPredicted RBP16.38■□□□□ 0.21
RNU4-6P-201ENST00000410804 PHF23Q9BUL5 403 aaPredicted RBP16.19■□□□□ 0.18
RNU4-6P-201ENST00000410804 FOXD1Q16676 465 aa15.28■□□□□ 0.04
RNU4-6P-201ENST00000410804 PLPPR3Q6T4P5 718 aa14.61□□□□□ -0.07
RNU4-6P-201ENST00000410804 PPP6R1Q9UPN7 881 aa14.32□□□□□ -0.12
RNU4-6P-201ENST00000410804 PIAS4Q8N2W9 510 aaPredicted RBP14.3□□□□□ -0.12
RNU4-6P-201ENST00000410804 ADRA2BP18089 450 aa14.29□□□□□ -0.12
RNU4-6P-201ENST00000410804 MSH5O43196 834 aa14.27□□□□□ -0.13
RNU4-6P-201ENST00000410804 POTEDQ86YR6 584 aa13.9□□□□□ -0.18
RNU4-6P-201ENST00000410804 MAPK8IP2Q13387 824 aaPredicted RBP13.12□□□□□ -0.31
RNU4-6P-201ENST00000410804 SCAF1Q9H7N4 1312 aaKnown RBP13.05□□□□□ -0.32
RNU4-6P-201ENST00000410804 DMRT2Q9Y5R5 561 aa12.99□□□□□ -0.33
RNU4-6P-201ENST00000410804 PPP4R3CPQ6ZMV5 832 aa12.83□□□□□ -0.36
RNU4-6P-201ENST00000410804 CNKSR2Q8WXI2 1034 aa12.57□□□□□ -0.4
RNU4-6P-201ENST00000410804 HOXD11P31277 338 aaPredicted RBP12.52□□□□□ -0.41
RNU4-6P-201ENST00000410804 DCAF8L1A6NGE4 600 aa12.51□□□□□ -0.41
RNU4-6P-201ENST00000410804 RNF216Q9NWF9 866 aaPredicted RBP12.44□□□□□ -0.42
RNU4-6P-201ENST00000410804 NCBP3Q53F19 620 aaKnown RBP12.33□□□□□ -0.44
RNU4-6P-201ENST00000410804 CACNB1Q02641 598 aaPredicted RBP12.26□□□□□ -0.45
RNU4-6P-201ENST00000410804 RNF39Q9H2S5 420 aa12.18□□□□□ -0.46
RNU4-6P-201ENST00000410804 NPM3O75607 178 aaKnown RBP12.16□□□□□ -0.46
RNU4-6P-201ENST00000410804 DNAJC5BQ9UF47 199 aa12.05□□□□□ -0.48
RNU4-6P-201ENST00000410804 C1QBPQ07021 282 aaKnown RBP12.01□□□□□ -0.49
RNU4-6P-201ENST00000410804 KCNA4P22459 653 aa11.96□□□□□ -0.49
RNU4-6P-201ENST00000410804 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.96□□□□□ -0.49
RNU4-6P-201ENST00000410804 U3KPZ7 1027 aaPredicted RBP11.69□□□□□ -0.54
RNU4-6P-201ENST00000410804 SLC4A2P04920 1241 aa11.6□□□□□ -0.55
RNU4-6P-201ENST00000410804 SPINK5Q9NQ38 1064 aaPredicted RBP11.54□□□□□ -0.56
RNU4-6P-201ENST00000410804 CAPN15O75808 1086 aa11.52□□□□□ -0.57
RNU4-6P-201ENST00000410804 DSG3P32926 999 aa11.43□□□□□ -0.58
RNU4-6P-201ENST00000410804 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.36□□□□□ -0.59
RNU4-6P-201ENST00000410804 APLP2Q06481 763 aa11.36□□□□□ -0.59
RNU4-6P-201ENST00000410804 HNRNPUL2Q1KMD3 747 aaKnown RBP11.36□□□□□ -0.59
RNU4-6P-201ENST00000410804 TRHP20396 242 aaPredicted RBP11.35□□□□□ -0.59
RNU4-6P-201ENST00000410804 SAMD1Q6SPF0 538 aaPredicted RBP11.3□□□□□ -0.6
RNU4-6P-201ENST00000410804 SLC4A1APQ9BWU0 796 aaKnown RBP11.29□□□□□ -0.6
RNU4-6P-201ENST00000410804 ZNF219Q9P2Y4 722 aaPredicted RBP11.29□□□□□ -0.6
RNU4-6P-201ENST00000410804 ABCB7O75027 752 aa11.26□□□□□ -0.61
RNU4-6P-201ENST00000410804 MYCNP04198 464 aaPredicted RBP11.24□□□□□ -0.61
RNU4-6P-201ENST00000410804 FOXD4L1Q9NU39 408 aa11.13□□□□□ -0.63
RNU4-6P-201ENST00000410804 POLA2Q14181 598 aa11.05□□□□□ -0.64
RNU4-6P-201ENST00000410804 ATF5Q9Y2D1 282 aaPredicted RBP11□□□□□ -0.65
RNU4-6P-201ENST00000410804 ZBTB22O15209 634 aa10.98□□□□□ -0.65
RNU4-6P-201ENST00000410804 POTEHQ6S545 545 aa10.9□□□□□ -0.66
RNU4-6P-201ENST00000410804 RBM42Q9BTD8 480 aaKnown RBP10.89□□□□□ -0.67
RNU4-6P-201ENST00000410804 ZBTB12Q9Y330 459 aaPredicted RBP10.78□□□□□ -0.68
RNU4-6P-201ENST00000410804 ATXN8OSP0DMR3 200 aa10.77□□□□□ -0.69
RNU4-6P-201ENST00000410804 OSCARQ8IYS5 282 aa10.68□□□□□ -0.7
RNU4-6P-201ENST00000410804 CHRDL2Q6WN34 429 aa10.65□□□□□ -0.7
RNU4-6P-201ENST00000410804 AKT1S1Q96B36 256 aa10.65□□□□□ -0.7
RNU4-6P-201ENST00000410804 FBLN2P98095 1184 aa10.56□□□□□ -0.72
RNU4-6P-201ENST00000410804 REM2Q8IYK8 340 aaPredicted RBP10.56□□□□□ -0.72
RNU4-6P-201ENST00000410804 CSRNP3Q8WYN3 585 aa10.51□□□□□ -0.73
RNU4-6P-201ENST00000410804 MKRN4PQ13434 485 aaPredicted RBP10.48□□□□□ -0.73
RNU4-6P-201ENST00000410804 SPDYE2BA6NHP3 402 aa10.46□□□□□ -0.73
RNU4-6P-201ENST00000410804 SPDYE6P0CI01 402 aa10.46□□□□□ -0.73
RNU4-6P-201ENST00000410804 SPDYE2Q495Y8 402 aa10.46□□□□□ -0.73
RNU4-6P-201ENST00000410804 PITPNM1O00562 1244 aa10.45□□□□□ -0.74
RNU4-6P-201ENST00000410804 PIP4P2Q8N4L2 257 aa10.41□□□□□ -0.74
RNU4-6P-201ENST00000410804 EHMT2Q96KQ7 1210 aa10.41□□□□□ -0.74
RNU4-6P-201ENST00000410804 ZNF692Q9BU19 519 aaPredicted RBP10.37□□□□□ -0.75
RNU4-6P-201ENST00000410804 FXR2P51116 673 aaKnown RBP eCLIP10.34□□□□□ -0.75
RNU4-6P-201ENST00000410804 CLEC11AQ9Y240 323 aa10.31□□□□□ -0.76
RNU4-6P-201ENST00000410804 SSUH2Q9Y2M2 353 aa10.31□□□□□ -0.76
RNU4-6P-201ENST00000410804 SPDYE1Q8NFV5 336 aaPredicted RBP10.28□□□□□ -0.76
RNU4-6P-201ENST00000410804 HAX1O00165 279 aa10.24□□□□□ -0.77
RNU4-6P-201ENST00000410804 SP7Q8TDD2 431 aaPredicted RBP10.23□□□□□ -0.77
RNU4-6P-201ENST00000410804 PABPN1Q86U42 306 aaKnown RBP eCLIP10.22□□□□□ -0.77
RNU4-6P-201ENST00000410804 PRKAR2AP13861 404 aaKnown RBP10.19□□□□□ -0.78
RNU4-6P-201ENST00000410804 PRR29P0C7W0 189 aa10.12□□□□□ -0.79
RNU4-6P-201ENST00000410804 EVX2Q03828 476 aa10.11□□□□□ -0.79
RNU4-6P-201ENST00000410804 CHADLQ6NUI6 762 aa10.1□□□□□ -0.79
RNU4-6P-201ENST00000410804 C19orf67A6NJJ6 358 aa10.01□□□□□ -0.81
RNU4-6P-201ENST00000410804 SPDYE4A6NLX3 237 aa10.01□□□□□ -0.81
RNU4-6P-201ENST00000410804 FARP1Q9Y4F1 1045 aaPredicted RBP9.93□□□□□ -0.82
RNU4-6P-201ENST00000410804 STAG3Q9UJ98 1225 aa9.92□□□□□ -0.82
RNU4-6P-201ENST00000410804 GABBR2O75899 941 aa9.87□□□□□ -0.83
RNU4-6P-201ENST00000410804 CD44P16070 742 aaKnown RBP9.87□□□□□ -0.83
RNU4-6P-201ENST00000410804 CREBZFQ9NS37 354 aa9.86□□□□□ -0.83
RNU4-6P-201ENST00000410804 NISCHQ9Y2I1 1504 aa9.79□□□□□ -0.84
RNU4-6P-201ENST00000410804 ZRANB1Q9UGI0 708 aa9.74□□□□□ -0.85
RNU4-6P-201ENST00000410804 PROM2Q8N271 834 aa9.73□□□□□ -0.85
RNU4-6P-201ENST00000410804 CLCN6P51797 869 aa9.69□□□□□ -0.86
RNU4-6P-201ENST00000410804 ZNF579Q8NAF0 562 aaKnown RBP9.69□□□□□ -0.86
RNU4-6P-201ENST00000410804 NPM1P06748 294 aaKnown RBP eCLIP9.68□□□□□ -0.86
RNU4-6P-201ENST00000410804 MNX1P50219 401 aaPredicted RBP9.68□□□□□ -0.86
RNU4-6P-201ENST00000410804 PAK3O75914 559 aaPredicted RBP9.66□□□□□ -0.86
RNU4-6P-201ENST00000410804 POTEIP0CG38 1075 aa9.66□□□□□ -0.86
RNU4-6P-201ENST00000410804 DCBLD2Q96PD2 775 aa9.63□□□□□ -0.87
RNU4-6P-201ENST00000410804 LHX8Q68G74 356 aa9.61□□□□□ -0.87
RNU4-6P-201ENST00000410804 GALR2O43603 387 aaPredicted RBP9.6□□□□□ -0.87
RNU4-6P-201ENST00000410804 PHF12Q96QT6 1004 aa9.6□□□□□ -0.87
RNU4-6P-201ENST00000410804 MIER1Q8N108 512 aa9.56□□□□□ -0.88
RNU4-6P-201ENST00000410804 FKBP8Q14318 412 aa9.55□□□□□ -0.88
RNU4-6P-201ENST00000410804 PLEKHG5O94827 1062 aa9.54□□□□□ -0.88
RNU4-6P-201ENST00000410804 TSPYL2Q9H2G4 693 aaPredicted RBP9.54□□□□□ -0.88
RNU4-6P-201ENST00000410804 PLCD3Q8N3E9 789 aa9.48□□□□□ -0.89
RNU4-6P-201ENST00000410804 MS4A3Q96HJ5 214 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms