Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 MEF2BNBP1-201ENST00000502742 330 ntBASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 AC117422.1-201ENST00000508263 379 ntTSL 3 BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 RNU6-1256P-201ENST00000516539 103 ntBASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 RNU6-703P-201ENST00000516946 107 ntBASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 RNU6-1270P-201ENST00000517128 108 ntBASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 AC079602.2-201ENST00000538389 283 ntBASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 AC079360.1-201ENST00000543848 434 ntTSL 3 BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 AC104758.1-201ENST00000563867 380 ntBASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 AC034105.4-201ENST00000568304 277 ntBASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 AC133561.3-201ENST00000568778 351 ntBASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 RN7SL431P-201ENST00000582918 305 ntBASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 MIR4686-201ENST00000584128 76 ntBASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 AC245748.1-201ENST00000588212 561 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 MALAT1-204ENST00000610481 353 ntTSL 3 BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 AC006133.1-201ENST00000617106 264 ntBASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 AC087741.2-201ENST00000619415 172 ntBASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 AC092135.2-201ENST00000624702 506 ntBASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 MIR203B-201ENST00000636080 86 ntBASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 ARFIP1-201ENST00000353617 3111 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 HKR1-202ENST00000392153 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 APC2-203ENST00000535453 11656 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 AL365217.1-201ENST00000398578 2436 ntBASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 ANKUB1-201ENST00000446160 2419 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 AC018630.2-201ENST00000534866 2403 ntBASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 GTF3C1-201ENST00000356183 7018 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 GABRR1-207ENST00000621627 2857 ntTSL 5 BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 AC024610.2-204ENST00000637478 2867 ntTSL 5 BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 AP000547.3-204ENST00000588548 2523 ntBASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 CLUL1-203ENST00000540035 2199 ntTSL 2 BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 GP2-201ENST00000302555 3406 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 SSBP3-AS1-201ENST00000361350 2624 ntBASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 C20orf197-201ENST00000625080 2732 ntTSL 2 BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 VPS13A-205ENST00000376636 11145 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 ORC1-202ENST00000371568 3157 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 SLC45A4-203ENST00000519067 7483 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 DYNC1I1-206ENST00000457059 2393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 ZNF275-202ENST00000370251 6320 ntTSL 2 BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 GOLGA4-202ENST00000361924 7772 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 SALL1-202ENST00000440970 5253 ntTSL 5 BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 TWF1-211ENST00000552521 3012 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 RALGDS-204ENST00000393157 3689 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 PPP6R3-201ENST00000265636 4794 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 GRIA1-208ENST00000518142 2761 ntTSL 2 BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 ZNF587-201ENST00000339656 6882 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 LINC00402-201ENST00000419499 3340 ntTSL 2 BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 MYH13-201ENST00000252172 5992 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 LRRC40-201ENST00000370952 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 CTAGE5-203ENST00000341502 4091 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 AL121832.3-201ENST00000616512 3700 ntBASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 TRPC2-201ENST00000451043 3173 ntBASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 GUCY1A3-204ENST00000455639 2631 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 UNC45B-201ENST00000268876 5679 ntAPPRIS P3 TSL 5 BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 JCAD-201ENST00000375377 9265 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 TTC31-202ENST00000410003 3358 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 TMPRSS4-AS1-204ENST00000636151 3397 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 ARSF-202ENST00000381127 2164 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 AC006116.1-201ENST00000587908 2171 ntBASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 PDXK-209ENST00000467908 7194 ntTSL 3 BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 DDX3X-203ENST00000457138 5346 ntTSL 2 BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 NUDT13-207ENST00000544879 2258 ntTSL 2 BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 EPHA5-206ENST00000622150 8421 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 NFASC-201ENST00000339876 10333 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 SAMD8-204ENST00000542569 6782 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 ZNF674-207ENST00000523374 4073 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 SEMA6A-201ENST00000257414 4256 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 CHST6-201ENST00000332272 7957 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 ADGRG2-204ENST00000357544 4678 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 SNORA27.1-201ENST00000362604 124 ntBASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 RN7SKP178-201ENST00000365005 329 ntBASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 SNORA67.2-201ENST00000384300 149 ntBASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 U3.24-201ENST00000391177 215 ntBASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 AL355796.1-201ENST00000406706 323 ntBASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 AL137784.1-201ENST00000407121 745 ntBASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 LYG2-202ENST00000409238 778 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 AC073464.2-201ENST00000412994 343 ntBASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 ACTG1P24-201ENST00000423783 877 ntBASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 AC027124.2-201ENST00000428249 105 ntBASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 RPL13AP6-201ENST00000430133 612 ntBASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 RPSAP17-201ENST00000437336 883 ntBASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 AC008132.2-201ENST00000437537 391 ntBASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 SNHG15-201ENST00000438705 509 ntTSL 3 BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 AC099796.2-201ENST00000444140 108 ntBASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 AL157823.2-201ENST00000452048 669 ntTSL 3 BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 AL589674.1-201ENST00000454401 222 ntTSL 5 BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 AL031727.1-201ENST00000457263 455 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 213.2 ms