Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TRIM4Q9C037 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.43□□□□□ -1.7
TRIM4Q9C037 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM4Q9C037 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.42□□□□□ -1.7
TRIM4Q9C037 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM4Q9C037 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.42□□□□□ -1.7
TRIM4Q9C037 AC097504.1-201ENST00000515103 2415 ntBASIC4.42□□□□□ -1.7
TRIM4Q9C037 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.42□□□□□ -1.7
TRIM4Q9C037 AL138878.1-201ENST00000405131 347 ntBASIC4.42□□□□□ -1.7
TRIM4Q9C037 UQCRBP1-201ENST00000421129 336 ntBASIC4.42□□□□□ -1.7
TRIM4Q9C037 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.42□□□□□ -1.7
TRIM4Q9C037 MARK2P15-201ENST00000432204 2186 ntBASIC4.42□□□□□ -1.7
TRIM4Q9C037 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.42□□□□□ -1.7
TRIM4Q9C037 RPL23AP24-201ENST00000458203 385 ntBASIC4.42□□□□□ -1.7
TRIM4Q9C037 RN7SL542P-201ENST00000467147 294 ntBASIC4.42□□□□□ -1.7
TRIM4Q9C037 AK4P6-201ENST00000505168 528 ntBASIC4.42□□□□□ -1.7
TRIM4Q9C037 PARP4P3-201ENST00000510265 317 ntBASIC4.42□□□□□ -1.7
TRIM4Q9C037 AC015795.1-201ENST00000513669 327 ntBASIC4.42□□□□□ -1.7
TRIM4Q9C037 AC090151.1-201ENST00000520784 730 ntBASIC4.42□□□□□ -1.7
TRIM4Q9C037 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.42□□□□□ -1.7
TRIM4Q9C037 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.42□□□□□ -1.7
TRIM4Q9C037 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.42□□□□□ -1.7
TRIM4Q9C037 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.42□□□□□ -1.7
TRIM4Q9C037 AC068446.3-201ENST00000555285 382 ntBASIC4.42□□□□□ -1.7
TRIM4Q9C037 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.42□□□□□ -1.7
TRIM4Q9C037 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.42□□□□□ -1.7
TRIM4Q9C037 AC069061.3-201ENST00000582254 823 ntBASIC4.42□□□□□ -1.7
TRIM4Q9C037 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM4Q9C037 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.42□□□□□ -1.7
TRIM4Q9C037 AC008782.1-201ENST00000603386 430 ntBASIC4.42□□□□□ -1.7
TRIM4Q9C037 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM4Q9C037 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.42□□□□□ -1.7
TRIM4Q9C037 MAPK10-253ENST00000641010 4072 ntBASIC4.42□□□□□ -1.7
TRIM4Q9C037 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM4Q9C037 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.42□□□□□ -1.7
TRIM4Q9C037 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.42□□□□□ -1.7
TRIM4Q9C037 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM4Q9C037 AC025031.4-201ENST00000621248 3271 ntBASIC4.41□□□□□ -1.7
TRIM4Q9C037 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
TRIM4Q9C037 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
TRIM4Q9C037 AL442639.1-201ENST00000625030 1899 ntBASIC4.41□□□□□ -1.7
TRIM4Q9C037 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.41□□□□□ -1.7
TRIM4Q9C037 RLIMP2-201ENST00000427891 1563 ntBASIC4.41□□□□□ -1.7
TRIM4Q9C037 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.41□□□□□ -1.7
TRIM4Q9C037 AC093909.5-201ENST00000621839 1799 ntBASIC4.41□□□□□ -1.7
TRIM4Q9C037 OR56B2P-201ENST00000317102 954 ntBASIC4.41□□□□□ -1.7
TRIM4Q9C037 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM4Q9C037 RN7SKP280-201ENST00000364196 304 ntBASIC4.41□□□□□ -1.7
TRIM4Q9C037 RNA5SP151-201ENST00000365632 117 ntBASIC4.41□□□□□ -1.7
TRIM4Q9C037 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
TRIM4Q9C037 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM4Q9C037 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
TRIM4Q9C037 CASKP1-201ENST00000412870 582 ntBASIC4.41□□□□□ -1.7
TRIM4Q9C037 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM4Q9C037 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.41□□□□□ -1.7
TRIM4Q9C037 RPL23AP83-201ENST00000434984 473 ntBASIC4.41□□□□□ -1.7
TRIM4Q9C037 AC097523.2-201ENST00000435551 652 ntBASIC4.41□□□□□ -1.7
TRIM4Q9C037 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.41□□□□□ -1.7
TRIM4Q9C037 RPS27AP15-201ENST00000447672 466 ntBASIC4.41□□□□□ -1.7
TRIM4Q9C037 RPS5P7-201ENST00000456664 608 ntBASIC4.41□□□□□ -1.7
TRIM4Q9C037 RPL7P19-201ENST00000469948 618 ntBASIC4.41□□□□□ -1.7
TRIM4Q9C037 S100A11P1-201ENST00000477525 312 ntBASIC4.41□□□□□ -1.7
TRIM4Q9C037 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.41□□□□□ -1.7
TRIM4Q9C037 RNA5SP446-201ENST00000515955 82 ntBASIC4.41□□□□□ -1.7
TRIM4Q9C037 OR5M7P-201ENST00000526140 972 ntBASIC4.41□□□□□ -1.7
TRIM4Q9C037 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.41□□□□□ -1.7
TRIM4Q9C037 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.41□□□□□ -1.7
TRIM4Q9C037 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.41□□□□□ -1.7
TRIM4Q9C037 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.41□□□□□ -1.7
TRIM4Q9C037 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
TRIM4Q9C037 AC017100.2-201ENST00000584628 355 ntBASIC4.41□□□□□ -1.7
TRIM4Q9C037 OR6R2P-201ENST00000609216 300 ntBASIC4.41□□□□□ -1.7
TRIM4Q9C037 AL031666.3-201ENST00000609320 1006 ntBASIC4.41□□□□□ -1.7
TRIM4Q9C037 AL445567.2-201ENST00000618935 498 ntBASIC4.41□□□□□ -1.7
TRIM4Q9C037 AL049536.1-201ENST00000625043 744 ntBASIC4.41□□□□□ -1.7
TRIM4Q9C037 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM4Q9C037 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.41□□□□□ -1.7
TRIM4Q9C037 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.41□□□□□ -1.7
TRIM4Q9C037 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM4Q9C037 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM4Q9C037 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
TRIM4Q9C037 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM4Q9C037 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM4Q9C037 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM4Q9C037 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM4Q9C037 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM4Q9C037 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.7
TRIM4Q9C037 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.4□□□□□ -1.7
TRIM4Q9C037 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.4□□□□□ -1.7
TRIM4Q9C037 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
TRIM4Q9C037 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
TRIM4Q9C037 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
TRIM4Q9C037 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
TRIM4Q9C037 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.4□□□□□ -1.7
TRIM4Q9C037 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM4Q9C037 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM4Q9C037 RN7SKP167-201ENST00000411047 285 ntBASIC4.4□□□□□ -1.71
TRIM4Q9C037 TRIM60P17-201ENST00000415181 719 ntBASIC4.4□□□□□ -1.71
TRIM4Q9C037 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM4Q9C037 AC092647.1-201ENST00000420654 287 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms