Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
PCDHGA11Q9Y5H2 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.65□□□□□ -1.35
PCDHGA11Q9Y5H2 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
PCDHGA11Q9Y5H2 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC6.65□□□□□ -1.35
PCDHGA11Q9Y5H2 AP002800.1-201ENST00000624982 2225 ntBASIC6.65□□□□□ -1.35
PCDHGA11Q9Y5H2 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
PCDHGA11Q9Y5H2 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
PCDHGA11Q9Y5H2 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
PCDHGA11Q9Y5H2 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
PCDHGA11Q9Y5H2 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
PCDHGA11Q9Y5H2 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.65□□□□□ -1.35
PCDHGA11Q9Y5H2 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 OR5M2P-202ENST00000641241 4242 ntBASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 RNU6-996P-201ENST00000365438 107 ntBASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 RNA5SP280-201ENST00000411230 115 ntBASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 RPSAP60-201ENST00000415403 880 ntBASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 CHEK2P3-201ENST00000416118 248 ntBASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 GRPEL2P2-201ENST00000421856 670 ntBASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 AC007365.2-201ENST00000428806 458 ntBASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 AC018804.1-201ENST00000430381 618 ntBASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 GPM6BP2-201ENST00000432046 144 ntBASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 RPL23AP30-201ENST00000432419 501 ntBASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 BX679664.2-201ENST00000439282 283 ntBASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 RPS15AP9-201ENST00000439856 381 ntBASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 GPM6BP1-201ENST00000446387 144 ntBASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 AL354714.5-201ENST00000450131 590 ntBASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 CACYBPP2-201ENST00000453625 678 ntBASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 PPP1R2P5-201ENST00000457256 603 ntBASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 RPL7P39-201ENST00000481157 744 ntBASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 AC090096.1-201ENST00000489168 390 ntBASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 RPS4XP14-201ENST00000493072 781 ntBASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 RN7SKP11-201ENST00000517018 287 ntBASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 AC107934.1-201ENST00000522215 217 ntBASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 SUB1P1-201ENST00000524415 382 ntBASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 AC092375.1-201ENST00000550410 637 ntBASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 RN7SL199P-201ENST00000578752 281 ntBASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 RN7SL656P-201ENST00000579044 281 ntBASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 RN7SL404P-201ENST00000582421 281 ntBASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 AC011447.2-201ENST00000592921 283 ntBASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 AL022345.1-201ENST00000607292 135 ntBASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 RNU6ATAC35P-201ENST00000609276 444 ntBASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 AC040896.1-201ENST00000613819 479 ntBASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 MIR665-201ENST00000635949 72 ntBASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 EEF1A1P16-201ENST00000325349 1414 ntBASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 KPNA2P2-201ENST00000419546 1489 ntBASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 MKI67P1-201ENST00000604297 1460 ntBASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHGA11Q9Y5H2 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms