Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PCDHB13Q9Y5F0 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC8.39□□□□□ -1.07
PCDHB13Q9Y5F0 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC8.39□□□□□ -1.07
PCDHB13Q9Y5F0 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC8.39□□□□□ -1.07
PCDHB13Q9Y5F0 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC8.39□□□□□ -1.07
PCDHB13Q9Y5F0 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC8.39□□□□□ -1.07
PCDHB13Q9Y5F0 AC116533.1-201ENST00000459748 321 ntBASIC8.39□□□□□ -1.07
PCDHB13Q9Y5F0 FTH1P2-201ENST00000466086 412 ntBASIC8.39□□□□□ -1.07
PCDHB13Q9Y5F0 DYNLL1P5-201ENST00000467158 270 ntBASIC8.39□□□□□ -1.07
PCDHB13Q9Y5F0 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC8.39□□□□□ -1.07
PCDHB13Q9Y5F0 TBCAP3-201ENST00000512475 312 ntBASIC8.39□□□□□ -1.07
PCDHB13Q9Y5F0 RNU6-1069P-201ENST00000516612 133 ntBASIC8.39□□□□□ -1.07
PCDHB13Q9Y5F0 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC8.39□□□□□ -1.07
PCDHB13Q9Y5F0 AC090115.3-201ENST00000553218 849 ntBASIC8.39□□□□□ -1.07
PCDHB13Q9Y5F0 AC090774.2-201ENST00000584708 322 ntBASIC8.39□□□□□ -1.07
PCDHB13Q9Y5F0 AC145423.1-201ENST00000605712 336 ntBASIC8.39□□□□□ -1.07
PCDHB13Q9Y5F0 AC016582.3-206ENST00000636547 207 ntBASIC8.39□□□□□ -1.07
PCDHB13Q9Y5F0 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
PCDHB13Q9Y5F0 ZNF806-201ENST00000438300 1774 ntBASIC8.39□□□□□ -1.07
PCDHB13Q9Y5F0 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PCDHB13Q9Y5F0 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PCDHB13Q9Y5F0 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC8.39□□□□□ -1.07
PCDHB13Q9Y5F0 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
PCDHB13Q9Y5F0 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PCDHB13Q9Y5F0 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PCDHB13Q9Y5F0 ATM-215ENST00000530958 5718 ntTSL 2 BASIC8.39□□□□□ -1.07
PCDHB13Q9Y5F0 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PCDHB13Q9Y5F0 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PCDHB13Q9Y5F0 AL359893.1-201ENST00000447628 1580 ntBASIC8.39□□□□□ -1.07
PCDHB13Q9Y5F0 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PCDHB13Q9Y5F0 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
PCDHB13Q9Y5F0 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC8.39□□□□□ -1.07
PCDHB13Q9Y5F0 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PCDHB13Q9Y5F0 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PCDHB13Q9Y5F0 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
PCDHB13Q9Y5F0 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 AC016747.1-201ENST00000420918 2532 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 Y_RNA.84-201ENST00000363011 104 ntBASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 Y_RNA.105-201ENST00000363182 111 ntBASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 RNU6-511P-201ENST00000363496 107 ntBASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 RNA5SP79-201ENST00000365193 109 ntBASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 SNORA51.6-201ENST00000384151 125 ntBASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 Y_RNA.576-201ENST00000384781 102 ntBASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 RNA5SP297-201ENST00000391029 113 ntBASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 RPL23AP69-201ENST00000431134 458 ntBASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 ANKRD54P1-201ENST00000433115 471 ntBASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 OR3D1P-201ENST00000438288 955 ntBASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 AC018738.1-201ENST00000441378 210 ntBASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 AC107983.1-201ENST00000442562 210 ntBASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 RPL4P2-201ENST00000447259 1282 ntBASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 RPL29P29-201ENST00000448725 423 ntBASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 RN7SL332P-201ENST00000482163 254 ntBASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 AC011411.1-201ENST00000509592 876 ntBASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 CYCSP28-201ENST00000534284 321 ntBASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 AC090415.1-201ENST00000581877 847 ntBASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 AC093503.1-202ENST00000598743 478 ntTSL 5 BASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 ANKRD20A19P-203ENST00000602724 295 ntBASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 AC073410.2-201ENST00000603240 332 ntBASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 SNX29P2-204ENST00000603801 875 ntBASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 AC002044.1-201ENST00000606707 158 ntBASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 AC064801.1-201ENST00000612025 407 ntBASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 AC025162.2-201ENST00000619602 560 ntBASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 AL450472.1-202ENST00000637286 180 ntBASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 ZNF20-201ENST00000334213 3061 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC8.38□□□□□ -1.07
PCDHB13Q9Y5F0 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
PCDHB13Q9Y5F0 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
PCDHB13Q9Y5F0 ZFP42-203ENST00000618147 2338 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
PCDHB13Q9Y5F0 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PCDHB13Q9Y5F0 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
PCDHB13Q9Y5F0 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
PCDHB13Q9Y5F0 TTC23-202ENST00000394129 2505 ntAPPRIS ALT2 TSL 2 BASIC8.37□□□□□ -1.07
PCDHB13Q9Y5F0 PPIA-204ENST00000468812 2238 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PCDHB13Q9Y5F0 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC8.37□□□□□ -1.07
PCDHB13Q9Y5F0 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
PCDHB13Q9Y5F0 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC8.37□□□□□ -1.07
PCDHB13Q9Y5F0 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
PCDHB13Q9Y5F0 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms