Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 SNRPGP6-201ENST00000451124 220 ntBASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 AL606490.1-201ENST00000452266 765 ntBASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 PPIAP27-201ENST00000453800 265 ntBASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 AC023194.2-201ENST00000465398 406 ntBASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 LSM3P4-201ENST00000502948 309 ntBASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 AC111000.3-201ENST00000508057 576 ntBASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 AL512310.1-201ENST00000548639 172 ntBASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 AL512360.1-201ENST00000555346 234 ntBASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 AC025678.1-201ENST00000567861 338 ntBASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 AC015917.1-201ENST00000579654 510 ntBASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 AC027229.1-201ENST00000583887 253 ntBASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 BNIP3P22-201ENST00000593399 556 ntBASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 AC010487.1-201ENST00000594408 1172 ntBASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 AC125494.2-201ENST00000602431 657 ntBASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 AL138895.2-201ENST00000603019 178 ntBASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 MEMO1P5-201ENST00000604810 406 ntBASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 AC005332.6-201ENST00000613178 446 ntBASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 MIR6861-201ENST00000618657 64 ntBASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 AC068880.5-201ENST00000624331 290 ntBASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 AC093591.3-201ENST00000634516 308 ntBASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 ATE1-AS1-202ENST00000636460 506 ntBASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 MTND4P27-201ENST00000450813 1354 ntBASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 AC100871.1-201ENST00000507871 1456 ntBASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SSBP3Q9BWW4 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSBP3Q9BWW4 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.11□□□□□ -1.59
SSBP3Q9BWW4 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSBP3Q9BWW4 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSBP3Q9BWW4 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SSBP3Q9BWW4 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSBP3Q9BWW4 AC068769.1-201ENST00000474767 2426 ntBASIC5.11□□□□□ -1.59
SSBP3Q9BWW4 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSBP3Q9BWW4 RNU6-433P-201ENST00000363216 104 ntBASIC5.11□□□□□ -1.59
SSBP3Q9BWW4 RNU6-1085P-201ENST00000363576 107 ntBASIC5.11□□□□□ -1.59
SSBP3Q9BWW4 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC5.11□□□□□ -1.59
SSBP3Q9BWW4 RNU6-723P-201ENST00000383973 107 ntBASIC5.11□□□□□ -1.59
SSBP3Q9BWW4 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SSBP3Q9BWW4 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SSBP3Q9BWW4 RPS3AP36-201ENST00000398190 775 ntBASIC5.11□□□□□ -1.59
SSBP3Q9BWW4 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.11□□□□□ -1.59
SSBP3Q9BWW4 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.11□□□□□ -1.59
SSBP3Q9BWW4 AL512422.1-201ENST00000407033 553 ntBASIC5.11□□□□□ -1.59
SSBP3Q9BWW4 VN1R36P-201ENST00000414936 291 ntBASIC5.11□□□□□ -1.59
SSBP3Q9BWW4 MTCO3P12-201ENST00000416718 547 ntBASIC5.11□□□□□ -1.59
SSBP3Q9BWW4 RPL35AP31-201ENST00000418340 337 ntBASIC5.11□□□□□ -1.59
SSBP3Q9BWW4 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.11□□□□□ -1.59
SSBP3Q9BWW4 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC5.11□□□□□ -1.59
SSBP3Q9BWW4 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SSBP3Q9BWW4 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC5.11□□□□□ -1.59
SSBP3Q9BWW4 AL035410.1-201ENST00000427409 427 ntBASIC5.11□□□□□ -1.59
SSBP3Q9BWW4 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.11□□□□□ -1.59
SSBP3Q9BWW4 AC023141.3-201ENST00000436698 278 ntBASIC5.11□□□□□ -1.59
SSBP3Q9BWW4 ATP5LP2-201ENST00000440646 311 ntBASIC5.11□□□□□ -1.59
SSBP3Q9BWW4 COX6CP18-201ENST00000448769 222 ntBASIC5.11□□□□□ -1.59
SSBP3Q9BWW4 DNAJC19P8-201ENST00000452887 259 ntBASIC5.11□□□□□ -1.59
SSBP3Q9BWW4 AC022364.2-201ENST00000457963 554 ntBASIC5.11□□□□□ -1.59
SSBP3Q9BWW4 HMGN2P25-201ENST00000486956 268 ntBASIC5.11□□□□□ -1.59
SSBP3Q9BWW4 AHI1-208ENST00000488690 712 ntTSL 5 BASIC5.11□□□□□ -1.59
SSBP3Q9BWW4 EIF3LP3-201ENST00000495197 822 ntBASIC5.11□□□□□ -1.59
SSBP3Q9BWW4 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.11□□□□□ -1.59
SSBP3Q9BWW4 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC5.11□□□□□ -1.59
SSBP3Q9BWW4 CDH12P2-201ENST00000504393 298 ntBASIC5.11□□□□□ -1.59
SSBP3Q9BWW4 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC5.11□□□□□ -1.59
SSBP3Q9BWW4 NAF1-205ENST00000509434 385 ntTSL 3 BASIC5.11□□□□□ -1.59
SSBP3Q9BWW4 BTG4P1-201ENST00000510421 183 ntBASIC5.11□□□□□ -1.59
SSBP3Q9BWW4 RNU6-416P-201ENST00000516265 103 ntBASIC5.11□□□□□ -1.59
SSBP3Q9BWW4 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.11□□□□□ -1.59
SSBP3Q9BWW4 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.11□□□□□ -1.59
SSBP3Q9BWW4 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms