Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC7.74□□□□□ -1.17
RC3H1Q5TC82 MIR4505-201ENST00000582238 73 ntBASIC7.74□□□□□ -1.17
RC3H1Q5TC82 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
RC3H1Q5TC82 AC008638.3-201ENST00000603341 463 ntBASIC7.74□□□□□ -1.17
RC3H1Q5TC82 AC009027.1-201ENST00000604510 479 ntBASIC7.74□□□□□ -1.17
RC3H1Q5TC82 AC009248.2-201ENST00000619826 254 ntBASIC7.74□□□□□ -1.17
RC3H1Q5TC82 AL137067.2-201ENST00000621202 131 ntBASIC7.74□□□□□ -1.17
RC3H1Q5TC82 AC015722.2-201ENST00000622210 551 ntBASIC7.74□□□□□ -1.17
RC3H1Q5TC82 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
RC3H1Q5TC82 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
RC3H1Q5TC82 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC7.74□□□□□ -1.17
RC3H1Q5TC82 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RC3H1Q5TC82 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
RC3H1Q5TC82 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
RC3H1Q5TC82 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
RC3H1Q5TC82 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
RC3H1Q5TC82 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
RC3H1Q5TC82 AC139426.3-201ENST00000605648 2059 ntBASIC7.74□□□□□ -1.17
RC3H1Q5TC82 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
RC3H1Q5TC82 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC7.73□□□□□ -1.17
RC3H1Q5TC82 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RC3H1Q5TC82 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
RC3H1Q5TC82 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RC3H1Q5TC82 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RC3H1Q5TC82 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC7.73□□□□□ -1.17
RC3H1Q5TC82 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RC3H1Q5TC82 ANKRD26P2-201ENST00000445530 1710 ntBASIC7.73□□□□□ -1.17
RC3H1Q5TC82 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RC3H1Q5TC82 OR52B1P-201ENST00000316506 909 ntBASIC7.73□□□□□ -1.17
RC3H1Q5TC82 RNU6-451P-201ENST00000362921 107 ntBASIC7.73□□□□□ -1.17
RC3H1Q5TC82 Y_RNA.384-201ENST00000383909 102 ntBASIC7.73□□□□□ -1.17
RC3H1Q5TC82 MIR937-201ENST00000401271 86 ntBASIC7.73□□□□□ -1.17
RC3H1Q5TC82 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC7.73□□□□□ -1.17
RC3H1Q5TC82 AC006065.1-201ENST00000422539 802 ntBASIC7.73□□□□□ -1.17
RC3H1Q5TC82 AL355433.1-201ENST00000422804 300 ntBASIC7.73□□□□□ -1.17
RC3H1Q5TC82 BX890604.2-201ENST00000427883 474 ntBASIC7.73□□□□□ -1.17
RC3H1Q5TC82 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC7.73□□□□□ -1.17
RC3H1Q5TC82 RPL37P21-201ENST00000435890 276 ntBASIC7.73□□□□□ -1.17
RC3H1Q5TC82 HSPE1P28-201ENST00000443139 211 ntBASIC7.73□□□□□ -1.17
RC3H1Q5TC82 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC7.73□□□□□ -1.17
RC3H1Q5TC82 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC7.73□□□□□ -1.17
RC3H1Q5TC82 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RC3H1Q5TC82 Y_RNA.639-201ENST00000458981 102 ntBASIC7.73□□□□□ -1.17
RC3H1Q5TC82 RN7SL515P-201ENST00000463999 297 ntBASIC7.73□□□□□ -1.17
RC3H1Q5TC82 AL163540.1-201ENST00000485382 386 ntBASIC7.73□□□□□ -1.17
RC3H1Q5TC82 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC7.73□□□□□ -1.17
RC3H1Q5TC82 RNA5SP34-201ENST00000516887 130 ntBASIC7.73□□□□□ -1.17
RC3H1Q5TC82 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC7.73□□□□□ -1.17
RC3H1Q5TC82 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC7.73□□□□□ -1.17
RC3H1Q5TC82 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC7.73□□□□□ -1.17
RC3H1Q5TC82 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC7.73□□□□□ -1.17
RC3H1Q5TC82 RBM22P12-201ENST00000567098 1255 ntBASIC7.73□□□□□ -1.17
RC3H1Q5TC82 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC7.73□□□□□ -1.17
RC3H1Q5TC82 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC7.73□□□□□ -1.17
RC3H1Q5TC82 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC7.73□□□□□ -1.17
RC3H1Q5TC82 AL109918.3-201ENST00000603072 338 ntBASIC7.73□□□□□ -1.17
RC3H1Q5TC82 AC011453.2-201ENST00000603737 729 ntBASIC7.73□□□□□ -1.17
RC3H1Q5TC82 AC016925.2-201ENST00000605108 242 ntBASIC7.73□□□□□ -1.17
RC3H1Q5TC82 AC211433.2-201ENST00000608433 387 ntBASIC7.73□□□□□ -1.17
RC3H1Q5TC82 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC7.73□□□□□ -1.17
RC3H1Q5TC82 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC7.73□□□□□ -1.17
RC3H1Q5TC82 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RC3H1Q5TC82 AC123769.2-201ENST00000624332 5984 ntBASIC7.73□□□□□ -1.17
RC3H1Q5TC82 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
RC3H1Q5TC82 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
RC3H1Q5TC82 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
RC3H1Q5TC82 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC7.73□□□□□ -1.17
RC3H1Q5TC82 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
RC3H1Q5TC82 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC7.73□□□□□ -1.17
RC3H1Q5TC82 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC7.73□□□□□ -1.17
RC3H1Q5TC82 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RC3H1Q5TC82 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
RC3H1Q5TC82 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC7.72□□□□□ -1.17
RC3H1Q5TC82 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
RC3H1Q5TC82 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RC3H1Q5TC82 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC7.72□□□□□ -1.17
RC3H1Q5TC82 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RC3H1Q5TC82 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RC3H1Q5TC82 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC7.72□□□□□ -1.17
RC3H1Q5TC82 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
RC3H1Q5TC82 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.72□□□□□ -1.17
RC3H1Q5TC82 SELENOWP1-201ENST00000322792 252 ntBASIC7.72□□□□□ -1.17
RC3H1Q5TC82 RNU5D-1-201ENST00000363299 116 ntBASIC7.72□□□□□ -1.17
RC3H1Q5TC82 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC7.72□□□□□ -1.17
RC3H1Q5TC82 Y_RNA.452-201ENST00000384202 108 ntBASIC7.72□□□□□ -1.17
RC3H1Q5TC82 RNU4-70P-201ENST00000384579 139 ntBASIC7.72□□□□□ -1.17
RC3H1Q5TC82 OR9R1P-201ENST00000412200 877 ntBASIC7.72□□□□□ -1.17
RC3H1Q5TC82 HMGB1P11-201ENST00000413899 637 ntBASIC7.72□□□□□ -1.17
RC3H1Q5TC82 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC7.72□□□□□ -1.17
RC3H1Q5TC82 RPL35AP12-201ENST00000425362 338 ntBASIC7.72□□□□□ -1.17
RC3H1Q5TC82 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC7.72□□□□□ -1.17
RC3H1Q5TC82 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC7.72□□□□□ -1.17
RC3H1Q5TC82 HMGB3P12-201ENST00000438745 556 ntBASIC7.72□□□□□ -1.17
RC3H1Q5TC82 MTND6P18-201ENST00000439477 513 ntBASIC7.72□□□□□ -1.17
RC3H1Q5TC82 SUMO1P3-201ENST00000439961 304 ntBASIC7.72□□□□□ -1.17
RC3H1Q5TC82 RPL7P12-201ENST00000446719 750 ntBASIC7.72□□□□□ -1.17
RC3H1Q5TC82 RPL23AP20-201ENST00000447965 421 ntBASIC7.72□□□□□ -1.17
RC3H1Q5TC82 AC092967.1-201ENST00000449016 481 ntBASIC7.72□□□□□ -1.17
RC3H1Q5TC82 AC079448.1-201ENST00000449377 373 ntBASIC7.72□□□□□ -1.17
RC3H1Q5TC82 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC7.72□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms