Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.72□□□□□ -1.65
CENPAP49450 HMGB1P40-201ENST00000525121 540 ntBASIC4.72□□□□□ -1.65
CENPAP49450 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.72□□□□□ -1.65
CENPAP49450 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CENPAP49450 YWHABP2-201ENST00000540201 713 ntBASIC4.72□□□□□ -1.65
CENPAP49450 AC023813.2-201ENST00000564321 469 ntBASIC4.72□□□□□ -1.65
CENPAP49450 MTND3P13-201ENST00000574391 343 ntBASIC4.72□□□□□ -1.65
CENPAP49450 RN7SL708P-201ENST00000580952 299 ntBASIC4.72□□□□□ -1.65
CENPAP49450 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC4.72□□□□□ -1.65
CENPAP49450 AL020997.3-201ENST00000602843 359 ntBASIC4.72□□□□□ -1.65
CENPAP49450 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.72□□□□□ -1.65
CENPAP49450 AP002782.1-201ENST00000623107 614 ntBASIC4.72□□□□□ -1.65
CENPAP49450 AP002791.1-201ENST00000623291 381 ntBASIC4.72□□□□□ -1.65
CENPAP49450 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC4.72□□□□□ -1.65
CENPAP49450 MIR1910-201ENST00000636955 80 ntBASIC4.72□□□□□ -1.65
CENPAP49450 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC4.72□□□□□ -1.65
CENPAP49450 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CENPAP49450 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CENPAP49450 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CENPAP49450 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
CENPAP49450 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.72□□□□□ -1.65
CENPAP49450 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CENPAP49450 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CENPAP49450 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CENPAP49450 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CENPAP49450 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.72□□□□□ -1.65
CENPAP49450 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CENPAP49450 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CENPAP49450 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.72□□□□□ -1.65
CENPAP49450 AC104446.1-201ENST00000613728 1321 ntBASIC4.72□□□□□ -1.65
CENPAP49450 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.71□□□□□ -1.65
CENPAP49450 MAPK10-320ENST00000641462 6696 ntBASIC4.71□□□□□ -1.66
CENPAP49450 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CENPAP49450 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CENPAP49450 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.71□□□□□ -1.66
CENPAP49450 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
CENPAP49450 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CENPAP49450 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CENPAP49450 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CENPAP49450 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CENPAP49450 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CENPAP49450 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CENPAP49450 RNU4-28P-201ENST00000364739 141 ntBASIC4.71□□□□□ -1.66
CENPAP49450 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CENPAP49450 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CENPAP49450 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.71□□□□□ -1.66
CENPAP49450 RPS24P7-201ENST00000416921 246 ntBASIC4.71□□□□□ -1.66
CENPAP49450 VPS26BP1-201ENST00000417155 755 ntBASIC4.71□□□□□ -1.66
CENPAP49450 MOB1AP1-201ENST00000430903 535 ntBASIC4.71□□□□□ -1.66
CENPAP49450 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.71□□□□□ -1.66
CENPAP49450 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.71□□□□□ -1.66
CENPAP49450 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.71□□□□□ -1.66
CENPAP49450 PTENP1-201ENST00000447117 1215 ntBASIC4.71□□□□□ -1.66
CENPAP49450 NDUFS5P3-201ENST00000450668 321 ntBASIC4.71□□□□□ -1.66
CENPAP49450 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.71□□□□□ -1.66
CENPAP49450 MTND6P6-201ENST00000478031 263 ntBASIC4.71□□□□□ -1.66
CENPAP49450 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CENPAP49450 RN7SL273P-201ENST00000481561 299 ntBASIC4.71□□□□□ -1.66
CENPAP49450 RPL23AP44-201ENST00000482216 473 ntBASIC4.71□□□□□ -1.66
CENPAP49450 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.71□□□□□ -1.66
CENPAP49450 ARL4AP1-201ENST00000503220 705 ntBASIC4.71□□□□□ -1.66
CENPAP49450 NIFKP7-201ENST00000503365 834 ntBASIC4.71□□□□□ -1.66
CENPAP49450 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.71□□□□□ -1.66
CENPAP49450 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.71□□□□□ -1.66
CENPAP49450 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.71□□□□□ -1.66
CENPAP49450 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.71□□□□□ -1.66
CENPAP49450 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.71□□□□□ -1.66
CENPAP49450 AC010306.1-201ENST00000523223 1117 ntBASIC4.71□□□□□ -1.66
CENPAP49450 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
CENPAP49450 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.71□□□□□ -1.66
CENPAP49450 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC4.71□□□□□ -1.66
CENPAP49450 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CENPAP49450 MIR5708-201ENST00000579723 85 ntBASIC4.71□□□□□ -1.66
CENPAP49450 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CENPAP49450 AC015688.2-201ENST00000584523 262 ntBASIC4.71□□□□□ -1.66
CENPAP49450 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.71□□□□□ -1.66
CENPAP49450 AC027243.2-201ENST00000602530 724 ntBASIC4.71□□□□□ -1.66
CENPAP49450 MTND3P19-201ENST00000603825 345 ntBASIC4.71□□□□□ -1.66
CENPAP49450 AC021749.1-201ENST00000604322 607 ntBASIC4.71□□□□□ -1.66
CENPAP49450 AC000068.2-201ENST00000608816 460 ntBASIC4.71□□□□□ -1.66
CENPAP49450 AC004908.3-201ENST00000610248 625 ntBASIC4.71□□□□□ -1.66
CENPAP49450 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.71□□□□□ -1.66
CENPAP49450 AL353726.1-201ENST00000614041 1000 ntBASIC4.71□□□□□ -1.66
CENPAP49450 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.71□□□□□ -1.66
CENPAP49450 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.71□□□□□ -1.66
CENPAP49450 ATE1-AS1-202ENST00000636460 506 ntBASIC4.71□□□□□ -1.66
CENPAP49450 LINC02211-204ENST00000642024 1070 ntBASIC4.71□□□□□ -1.66
CENPAP49450 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CENPAP49450 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CENPAP49450 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CENPAP49450 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.71□□□□□ -1.66
CENPAP49450 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CENPAP49450 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.71□□□□□ -1.66
CENPAP49450 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CENPAP49450 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CENPAP49450 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CENPAP49450 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CENPAP49450 AL356489.2-201ENST00000566968 3528 ntBASIC4.7□□□□□ -1.66
CENPAP49450 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CENPAP49450 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms