Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
APOBP04114 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
APOBP04114 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC2.47□□□□□ -2.01
APOBP04114 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC2.47□□□□□ -2.01
APOBP04114 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC2.47□□□□□ -2.01
APOBP04114 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
APOBP04114 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.47□□□□□ -2.01
APOBP04114 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC2.47□□□□□ -2.01
APOBP04114 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC2.47□□□□□ -2.01
APOBP04114 EIF4A1P1-201ENST00000420241 934 ntBASIC2.47□□□□□ -2.01
APOBP04114 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC2.47□□□□□ -2.01
APOBP04114 AC092641.1-201ENST00000440229 772 ntBASIC2.47□□□□□ -2.01
APOBP04114 OR52Y1P-201ENST00000452418 828 ntBASIC2.47□□□□□ -2.01
APOBP04114 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC2.47□□□□□ -2.01
APOBP04114 CYCSP30-201ENST00000546447 172 ntBASIC2.47□□□□□ -2.01
APOBP04114 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC2.47□□□□□ -2.01
APOBP04114 AC006077.1-201ENST00000604746 343 ntBASIC2.47□□□□□ -2.01
APOBP04114 AC022106.2-201ENST00000620114 757 ntBASIC2.47□□□□□ -2.01
APOBP04114 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
APOBP04114 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.47□□□□□ -2.01
APOBP04114 TEX41-256ENST00000626411 368 ntTSL 5 BASIC2.47□□□□□ -2.01
APOBP04114 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
APOBP04114 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
APOBP04114 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
APOBP04114 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC2.47□□□□□ -2.01
APOBP04114 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC2.47□□□□□ -2.01
APOBP04114 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
APOBP04114 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
APOBP04114 AC022417.1-201ENST00000624768 1303 ntBASIC2.47□□□□□ -2.01
APOBP04114 AC009229.4-201ENST00000623854 1947 ntBASIC2.47□□□□□ -2.01
APOBP04114 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC2.47□□□□□ -2.01
APOBP04114 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC2.47□□□□□ -2.01
APOBP04114 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
APOBP04114 PDSS1P2-201ENST00000449397 678 ntBASIC2.47□□□□□ -2.01
APOBP04114 RPL7P1-201ENST00000468161 747 ntBASIC2.47□□□□□ -2.01
APOBP04114 AC037198.2-201ENST00000478845 733 ntBASIC2.47□□□□□ -2.01
APOBP04114 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC2.47□□□□□ -2.01
APOBP04114 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC2.47□□□□□ -2.01
APOBP04114 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.47□□□□□ -2.01
APOBP04114 AP000641.1-201ENST00000531988 1639 ntBASIC2.47□□□□□ -2.01
APOBP04114 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
APOBP04114 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
APOBP04114 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.47□□□□□ -2.01
APOBP04114 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC2.47□□□□□ -2.01
APOBP04114 U3.26-201ENST00000391236 204 ntBASIC2.47□□□□□ -2.01
APOBP04114 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC2.47□□□□□ -2.01
APOBP04114 AL591503.2-201ENST00000442314 1005 ntBASIC2.47□□□□□ -2.01
APOBP04114 GAS5-223ENST00000452197 483 ntTSL 3 BASIC2.47□□□□□ -2.01
APOBP04114 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC2.47□□□□□ -2.01
APOBP04114 RNA5SP249-201ENST00000516127 99 ntBASIC2.47□□□□□ -2.01
APOBP04114 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.47□□□□□ -2.01
APOBP04114 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC2.47□□□□□ -2.01
APOBP04114 VPS13A-203ENST00000360280 15320 ntAPPRIS P4 TSL 1 (best) BASIC2.47□□□□□ -2.01
APOBP04114 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC2.47□□□□□ -2.01
APOBP04114 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
APOBP04114 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.01
APOBP04114 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
APOBP04114 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC2.46□□□□□ -2.01
APOBP04114 ZNF962P-201ENST00000443465 3140 ntBASIC2.46□□□□□ -2.01
APOBP04114 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
APOBP04114 RNA5SP267-201ENST00000364893 126 ntBASIC2.46□□□□□ -2.02
APOBP04114 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC2.46□□□□□ -2.02
APOBP04114 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC2.46□□□□□ -2.02
APOBP04114 RNA5SP306-201ENST00000411087 107 ntBASIC2.46□□□□□ -2.02
APOBP04114 PGBD4P8-201ENST00000412993 562 ntBASIC2.46□□□□□ -2.02
APOBP04114 NMNAT1P2-201ENST00000435192 860 ntBASIC2.46□□□□□ -2.02
APOBP04114 RPL23AP46-201ENST00000438548 490 ntBASIC2.46□□□□□ -2.02
APOBP04114 RPL36AP13-201ENST00000457490 317 ntBASIC2.46□□□□□ -2.02
APOBP04114 RPL23AP12-201ENST00000467573 473 ntBASIC2.46□□□□□ -2.02
APOBP04114 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC2.46□□□□□ -2.02
APOBP04114 AC127024.5-201ENST00000580085 462 ntBASIC2.46□□□□□ -2.02
APOBP04114 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC2.46□□□□□ -2.02
APOBP04114 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
APOBP04114 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC2.46□□□□□ -2.02
APOBP04114 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
APOBP04114 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC2.46□□□□□ -2.02
APOBP04114 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
APOBP04114 OR56B2P-201ENST00000317102 954 ntBASIC2.46□□□□□ -2.02
APOBP04114 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
APOBP04114 AL078604.1-201ENST00000404609 466 ntBASIC2.46□□□□□ -2.02
APOBP04114 GLS-204ENST00000409428 816 ntTSL 2 BASIC2.46□□□□□ -2.02
APOBP04114 AJ239321.1-201ENST00000424255 564 ntBASIC2.46□□□□□ -2.02
APOBP04114 RPL7P44-201ENST00000424827 742 ntBASIC2.46□□□□□ -2.02
APOBP04114 AC073063.1-201ENST00000434352 607 ntBASIC2.46□□□□□ -2.02
APOBP04114 AC006011.1-201ENST00000442758 349 ntBASIC2.46□□□□□ -2.02
APOBP04114 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC2.46□□□□□ -2.02
APOBP04114 RPL7P23-201ENST00000493874 747 ntBASIC2.46□□□□□ -2.02
APOBP04114 RNA5SP446-201ENST00000515955 82 ntBASIC2.46□□□□□ -2.02
APOBP04114 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
APOBP04114 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
APOBP04114 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
APOBP04114 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
APOBP04114 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
APOBP04114 FAP-203ENST00000443424 2598 ntTSL 2 BASIC2.46□□□□□ -2.02
APOBP04114 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
APOBP04114 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
APOBP04114 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC2.46□□□□□ -2.02
APOBP04114 ATP5JP1-201ENST00000431631 322 ntBASIC2.46□□□□□ -2.02
APOBP04114 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2.46□□□□□ -2.02
APOBP04114 AC091516.1-201ENST00000549191 703 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms