RNA–Protein interactions for RNA: ENST00000390441.2

TRAV9-2-201, Transcript of T cell receptor alpha variable 9-2, humanhuman

APPRIS P1 BASIC

Gene TRAV9-2, Length 394 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2-201ENST00000390441 AEBP2Q6ZN18 517 aaPredicted RBP14.85□□□□□ -0.03
TRAV9-2-201ENST00000390441 CHIC1Q5VXU3 224 aa14.36□□□□□ -0.11
TRAV9-2-201ENST00000390441 PHF23Q9BUL5 403 aaPredicted RBP12.65□□□□□ -0.38
TRAV9-2-201ENST00000390441 SENP3Q9H4L4 574 aaPredicted RBP12.57□□□□□ -0.4
TRAV9-2-201ENST00000390441 FOXD1Q16676 465 aa11.71□□□□□ -0.53
TRAV9-2-201ENST00000390441 PLPPR3Q6T4P5 718 aa11.58□□□□□ -0.56
TRAV9-2-201ENST00000390441 PPP6R1Q9UPN7 881 aa11.2□□□□□ -0.62
TRAV9-2-201ENST00000390441 ADRA2BP18089 450 aa11.16□□□□□ -0.62
TRAV9-2-201ENST00000390441 PIAS4Q8N2W9 510 aaPredicted RBP10.98□□□□□ -0.65
TRAV9-2-201ENST00000390441 MSH5O43196 834 aa10.81□□□□□ -0.68
TRAV9-2-201ENST00000390441 POTEDQ86YR6 584 aa10.25□□□□□ -0.77
TRAV9-2-201ENST00000390441 PPP4R3CPQ6ZMV5 832 aa10.19□□□□□ -0.78
TRAV9-2-201ENST00000390441 MAPK8IP2Q13387 824 aaPredicted RBP10.18□□□□□ -0.78
TRAV9-2-201ENST00000390441 SCAF1Q9H7N4 1312 aaKnown RBP10.16□□□□□ -0.78
TRAV9-2-201ENST00000390441 DMRT2Q9Y5R5 561 aa10.03□□□□□ -0.8
TRAV9-2-201ENST00000390441 CNKSR2Q8WXI2 1034 aa9.93□□□□□ -0.82
TRAV9-2-201ENST00000390441 NCBP3Q53F19 620 aaKnown RBP9.86□□□□□ -0.83
TRAV9-2-201ENST00000390441 KCNA4P22459 653 aa9.83□□□□□ -0.84
TRAV9-2-201ENST00000390441 HOXD11P31277 338 aaPredicted RBP9.79□□□□□ -0.84
TRAV9-2-201ENST00000390441 RNF216Q9NWF9 866 aaPredicted RBP9.78□□□□□ -0.84
TRAV9-2-201ENST00000390441 NPM3O75607 178 aaKnown RBP9.75□□□□□ -0.85
TRAV9-2-201ENST00000390441 DCAF8L1A6NGE4 600 aa9.55□□□□□ -0.88
TRAV9-2-201ENST00000390441 DNAJC5BQ9UF47 199 aa9.53□□□□□ -0.88
TRAV9-2-201ENST00000390441 NISCHQ9Y2I1 1504 aa9.38□□□□□ -0.91
TRAV9-2-201ENST00000390441 SLC4A1APQ9BWU0 796 aaKnown RBP9.31□□□□□ -0.92
TRAV9-2-201ENST00000390441 RNF39Q9H2S5 420 aa9.29□□□□□ -0.92
TRAV9-2-201ENST00000390441 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.28□□□□□ -0.92
TRAV9-2-201ENST00000390441 SLC4A2P04920 1241 aa9.27□□□□□ -0.93
TRAV9-2-201ENST00000390441 C1QBPQ07021 282 aaKnown RBP9.15□□□□□ -0.94
TRAV9-2-201ENST00000390441 U3KPZ7 1027 aaPredicted RBP9.15□□□□□ -0.94
TRAV9-2-201ENST00000390441 CACNB1Q02641 598 aaPredicted RBP9.1□□□□□ -0.95
TRAV9-2-201ENST00000390441 ZBTB22O15209 634 aa9.07□□□□□ -0.96
TRAV9-2-201ENST00000390441 FOXD4L1Q9NU39 408 aa9.06□□□□□ -0.96
TRAV9-2-201ENST00000390441 MYCNP04198 464 aaPredicted RBP8.99□□□□□ -0.97
TRAV9-2-201ENST00000390441 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.95□□□□□ -0.98
TRAV9-2-201ENST00000390441 HNRNPUL2Q1KMD3 747 aaKnown RBP8.95□□□□□ -0.98
TRAV9-2-201ENST00000390441 SPINK5Q9NQ38 1064 aaPredicted RBP8.94□□□□□ -0.98
TRAV9-2-201ENST00000390441 SAMD1Q6SPF0 538 aaPredicted RBP8.92□□□□□ -0.98
TRAV9-2-201ENST00000390441 CSRNP3Q8WYN3 585 aa8.89□□□□□ -0.99
TRAV9-2-201ENST00000390441 EHMT2Q96KQ7 1210 aa8.89□□□□□ -0.99
TRAV9-2-201ENST00000390441 CAPN15O75808 1086 aa8.86□□□□□ -0.99
TRAV9-2-201ENST00000390441 APLP2Q06481 763 aa8.86□□□□□ -0.99
TRAV9-2-201ENST00000390441 ATF5Q9Y2D1 282 aaPredicted RBP8.81□□□□□ -1
TRAV9-2-201ENST00000390441 TRHP20396 242 aaPredicted RBP8.8□□□□□ -1
TRAV9-2-201ENST00000390441 DSG3P32926 999 aa8.79□□□□□ -1
TRAV9-2-201ENST00000390441 ZNF219Q9P2Y4 722 aaPredicted RBP8.79□□□□□ -1
TRAV9-2-201ENST00000390441 ATXN8OSP0DMR3 200 aa8.76□□□□□ -1.01
TRAV9-2-201ENST00000390441 ABCB7O75027 752 aa8.7□□□□□ -1.02
TRAV9-2-201ENST00000390441 POLA2Q14181 598 aa8.65□□□□□ -1.02
TRAV9-2-201ENST00000390441 ZBTB12Q9Y330 459 aaPredicted RBP8.46□□□□□ -1.06
TRAV9-2-201ENST00000390441 MKRN4PQ13434 485 aaPredicted RBP8.42□□□□□ -1.06
TRAV9-2-201ENST00000390441 FBLN2P98095 1184 aa8.37□□□□□ -1.07
TRAV9-2-201ENST00000390441 OSCARQ8IYS5 282 aa8.36□□□□□ -1.07
TRAV9-2-201ENST00000390441 RBM42Q9BTD8 480 aaKnown RBP8.33□□□□□ -1.08
TRAV9-2-201ENST00000390441 SPDYE2BA6NHP3 402 aa8.25□□□□□ -1.09
TRAV9-2-201ENST00000390441 SPDYE6P0CI01 402 aa8.25□□□□□ -1.09
TRAV9-2-201ENST00000390441 SPDYE2Q495Y8 402 aa8.25□□□□□ -1.09
TRAV9-2-201ENST00000390441 AKT1S1Q96B36 256 aa8.23□□□□□ -1.09
TRAV9-2-201ENST00000390441 SSUH2Q9Y2M2 353 aa8.2□□□□□ -1.1
TRAV9-2-201ENST00000390441 ZNF692Q9BU19 519 aaPredicted RBP8.19□□□□□ -1.1
TRAV9-2-201ENST00000390441 REM2Q8IYK8 340 aaPredicted RBP8.16□□□□□ -1.1
TRAV9-2-201ENST00000390441 CCDC180Q9P1Z9 1646 aa8.16□□□□□ -1.1
TRAV9-2-201ENST00000390441 SPDYE4A6NLX3 237 aa8.12□□□□□ -1.11
TRAV9-2-201ENST00000390441 PABPN1Q86U42 306 aaKnown RBP eCLIP8.08□□□□□ -1.12
TRAV9-2-201ENST00000390441 PITPNM1O00562 1244 aa8.07□□□□□ -1.12
TRAV9-2-201ENST00000390441 CHRDL2Q6WN34 429 aa8.06□□□□□ -1.12
TRAV9-2-201ENST00000390441 PROM2Q8N271 834 aa8.03□□□□□ -1.12
TRAV9-2-201ENST00000390441 SPDYE1Q8NFV5 336 aaPredicted RBP8.02□□□□□ -1.13
TRAV9-2-201ENST00000390441 FKBP8Q14318 412 aa8.01□□□□□ -1.13
TRAV9-2-201ENST00000390441 CLEC11AQ9Y240 323 aa7.98□□□□□ -1.13
TRAV9-2-201ENST00000390441 FXR2P51116 673 aaKnown RBP eCLIP7.96□□□□□ -1.14
TRAV9-2-201ENST00000390441 POTEHQ6S545 545 aa7.96□□□□□ -1.14
TRAV9-2-201ENST00000390441 PIP4P2Q8N4L2 257 aa7.95□□□□□ -1.14
TRAV9-2-201ENST00000390441 PRR29P0C7W0 189 aa7.91□□□□□ -1.14
TRAV9-2-201ENST00000390441 STAG3Q9UJ98 1225 aa7.91□□□□□ -1.14
TRAV9-2-201ENST00000390441 ZCCHC6Q5VYS8 1495 aaKnown RBP7.86□□□□□ -1.15
TRAV9-2-201ENST00000390441 DCAF8L2P0C7V8 631 aa7.85□□□□□ -1.15
TRAV9-2-201ENST00000390441 PRKAR2AP13861 404 aaKnown RBP7.85□□□□□ -1.15
TRAV9-2-201ENST00000390441 CHADLQ6NUI6 762 aa7.83□□□□□ -1.16
TRAV9-2-201ENST00000390441 CREBZFQ9NS37 354 aa7.82□□□□□ -1.16
TRAV9-2-201ENST00000390441 ABCC9O60706 1549 aa7.81□□□□□ -1.16
TRAV9-2-201ENST00000390441 DCAF1Q9Y4B6 1507 aa7.77□□□□□ -1.17
TRAV9-2-201ENST00000390441 FARP1Q9Y4F1 1045 aaPredicted RBP7.75□□□□□ -1.17
TRAV9-2-201ENST00000390441 FBXO3Q9UK99 471 aa7.74□□□□□ -1.17
TRAV9-2-201ENST00000390441 MNX1P50219 401 aaPredicted RBP7.73□□□□□ -1.17
TRAV9-2-201ENST00000390441 MIER1Q8N108 512 aa7.71□□□□□ -1.18
TRAV9-2-201ENST00000390441 MYO15BQ96JP2 1530 aa7.71□□□□□ -1.18
TRAV9-2-201ENST00000390441 HAX1O00165 279 aa7.7□□□□□ -1.18
TRAV9-2-201ENST00000390441 C19orf67A6NJJ6 358 aa7.69□□□□□ -1.18
TRAV9-2-201ENST00000390441 EVX2Q03828 476 aa7.68□□□□□ -1.18
TRAV9-2-201ENST00000390441 PLCD3Q8N3E9 789 aa7.67□□□□□ -1.18
TRAV9-2-201ENST00000390441 NACADO15069 1562 aa7.67□□□□□ -1.18
TRAV9-2-201ENST00000390441 VASPP50552 380 aaPredicted RBP7.66□□□□□ -1.18
TRAV9-2-201ENST00000390441 PLEKHG5O94827 1062 aa7.63□□□□□ -1.19
TRAV9-2-201ENST00000390441 NPM1P06748 294 aaKnown RBP eCLIP7.63□□□□□ -1.19
TRAV9-2-201ENST00000390441 SHROOM4Q9ULL8 1493 aa7.62□□□□□ -1.19
TRAV9-2-201ENST00000390441 CD44P16070 742 aaKnown RBP7.61□□□□□ -1.19
TRAV9-2-201ENST00000390441 RB1CC1Q8TDY2 1594 aa7.61□□□□□ -1.19
TRAV9-2-201ENST00000390441 SP7Q8TDD2 431 aaPredicted RBP7.59□□□□□ -1.19
TRAV9-2-201ENST00000390441 IFNLR1Q8IU57 520 aaPredicted RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms