RNA–Protein interactions for RNA: ENST00000520513.1

LINC00535-204, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 305 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-204ENST00000520513 AEBP2Q6ZN18 517 aaPredicted RBP30.64■■■□□ 2.5
LINC00535-204ENST00000520513 CHIC1Q5VXU3 224 aa29.35■■■□□ 2.29
LINC00535-204ENST00000520513 PHF23Q9BUL5 403 aaPredicted RBP25.89■■□□□ 1.74
LINC00535-204ENST00000520513 SENP3Q9H4L4 574 aaPredicted RBP25.86■■□□□ 1.73
LINC00535-204ENST00000520513 FOXD1Q16676 465 aa24.19■■□□□ 1.46
LINC00535-204ENST00000520513 PLPPR3Q6T4P5 718 aa23.54■■□□□ 1.36
LINC00535-204ENST00000520513 PPP6R1Q9UPN7 881 aa23.01■■□□□ 1.27
LINC00535-204ENST00000520513 ADRA2BP18089 450 aa22.91■■□□□ 1.26
LINC00535-204ENST00000520513 PIAS4Q8N2W9 510 aaPredicted RBP22.61■■□□□ 1.21
LINC00535-204ENST00000520513 MSH5O43196 834 aa22.42■■□□□ 1.18
LINC00535-204ENST00000520513 POTEDQ86YR6 584 aa21.29■■□□□ 1
LINC00535-204ENST00000520513 MAPK8IP2Q13387 824 aaPredicted RBP20.96■□□□□ 0.95
LINC00535-204ENST00000520513 PPP4R3CPQ6ZMV5 832 aa20.76■□□□□ 0.91
LINC00535-204ENST00000520513 SCAF1Q9H7N4 1312 aaKnown RBP20.76■□□□□ 0.91
LINC00535-204ENST00000520513 DMRT2Q9Y5R5 561 aa20.63■□□□□ 0.89
LINC00535-204ENST00000520513 CNKSR2Q8WXI2 1034 aa20.22■□□□□ 0.83
LINC00535-204ENST00000520513 HOXD11P31277 338 aaPredicted RBP20.03■□□□□ 0.8
LINC00535-204ENST00000520513 RNF216Q9NWF9 866 aaPredicted RBP19.95■□□□□ 0.78
LINC00535-204ENST00000520513 NCBP3Q53F19 620 aaKnown RBP19.93■□□□□ 0.78
LINC00535-204ENST00000520513 KCNA4P22459 653 aa19.85■□□□□ 0.77
LINC00535-204ENST00000520513 NPM3O75607 178 aaKnown RBP19.83■□□□□ 0.77
LINC00535-204ENST00000520513 DCAF8L1A6NGE4 600 aa19.69■□□□□ 0.74
LINC00535-204ENST00000520513 DNAJC5BQ9UF47 199 aa19.26■□□□□ 0.67
LINC00535-204ENST00000520513 RNF39Q9H2S5 420 aa19.18■□□□□ 0.66
LINC00535-204ENST00000520513 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19■□□□□ 0.63
LINC00535-204ENST00000520513 CACNB1Q02641 598 aaPredicted RBP18.98■□□□□ 0.63
LINC00535-204ENST00000520513 SLC4A2P04920 1241 aa18.9■□□□□ 0.62
LINC00535-204ENST00000520513 C1QBPQ07021 282 aaKnown RBP18.89■□□□□ 0.61
LINC00535-204ENST00000520513 U3KPZ7 1027 aaPredicted RBP18.78■□□□□ 0.6
LINC00535-204ENST00000520513 SLC4A1APQ9BWU0 796 aaKnown RBP18.72■□□□□ 0.59
LINC00535-204ENST00000520513 SPINK5Q9NQ38 1064 aaPredicted RBP18.41■□□□□ 0.54
LINC00535-204ENST00000520513 ZBTB22O15209 634 aa18.34■□□□□ 0.53
LINC00535-204ENST00000520513 FOXD4L1Q9NU39 408 aa18.29■□□□□ 0.52
LINC00535-204ENST00000520513 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.23■□□□□ 0.51
LINC00535-204ENST00000520513 CAPN15O75808 1086 aa18.23■□□□□ 0.51
LINC00535-204ENST00000520513 MYCNP04198 464 aaPredicted RBP18.23■□□□□ 0.51
LINC00535-204ENST00000520513 HNRNPUL2Q1KMD3 747 aaKnown RBP18.23■□□□□ 0.51
LINC00535-204ENST00000520513 APLP2Q06481 763 aa18.19■□□□□ 0.5
LINC00535-204ENST00000520513 SAMD1Q6SPF0 538 aaPredicted RBP18.13■□□□□ 0.49
LINC00535-204ENST00000520513 DSG3P32926 999 aa18.11■□□□□ 0.49
LINC00535-204ENST00000520513 TRHP20396 242 aaPredicted RBP18.06■□□□□ 0.48
LINC00535-204ENST00000520513 ZNF219Q9P2Y4 722 aaPredicted RBP17.99■□□□□ 0.47
LINC00535-204ENST00000520513 ATF5Q9Y2D1 282 aaPredicted RBP17.98■□□□□ 0.47
LINC00535-204ENST00000520513 ABCB7O75027 752 aa17.93■□□□□ 0.46
LINC00535-204ENST00000520513 CSRNP3Q8WYN3 585 aa17.8■□□□□ 0.44
LINC00535-204ENST00000520513 EHMT2Q96KQ7 1210 aa17.72■□□□□ 0.43
LINC00535-204ENST00000520513 POLA2Q14181 598 aa17.69■□□□□ 0.42
LINC00535-204ENST00000520513 ATXN8OSP0DMR3 200 aa17.62■□□□□ 0.41
LINC00535-204ENST00000520513 ZBTB12Q9Y330 459 aaPredicted RBP17.29■□□□□ 0.36
LINC00535-204ENST00000520513 RBM42Q9BTD8 480 aaKnown RBP17.23■□□□□ 0.35
LINC00535-204ENST00000520513 MKRN4PQ13434 485 aaPredicted RBP17.15■□□□□ 0.34
LINC00535-204ENST00000520513 OSCARQ8IYS5 282 aa17.14■□□□□ 0.33
LINC00535-204ENST00000520513 FBLN2P98095 1184 aa16.98■□□□□ 0.31
LINC00535-204ENST00000520513 AKT1S1Q96B36 256 aa16.88■□□□□ 0.29
LINC00535-204ENST00000520513 SPDYE2BA6NHP3 402 aa16.79■□□□□ 0.28
LINC00535-204ENST00000520513 SPDYE6P0CI01 402 aa16.79■□□□□ 0.28
LINC00535-204ENST00000520513 SPDYE2Q495Y8 402 aa16.79■□□□□ 0.28
LINC00535-204ENST00000520513 REM2Q8IYK8 340 aaPredicted RBP16.77■□□□□ 0.28
LINC00535-204ENST00000520513 POTEHQ6S545 545 aa16.76■□□□□ 0.27
LINC00535-204ENST00000520513 SSUH2Q9Y2M2 353 aa16.69■□□□□ 0.26
LINC00535-204ENST00000520513 CHRDL2Q6WN34 429 aa16.68■□□□□ 0.26
LINC00535-204ENST00000520513 ZNF692Q9BU19 519 aaPredicted RBP16.67■□□□□ 0.26
LINC00535-204ENST00000520513 PITPNM1O00562 1244 aa16.61■□□□□ 0.25
LINC00535-204ENST00000520513 PABPN1Q86U42 306 aaKnown RBP eCLIP16.48■□□□□ 0.23
LINC00535-204ENST00000520513 PIP4P2Q8N4L2 257 aa16.42■□□□□ 0.22
LINC00535-204ENST00000520513 SPDYE4A6NLX3 237 aa16.41■□□□□ 0.22
LINC00535-204ENST00000520513 FXR2P51116 673 aaKnown RBP eCLIP16.38■□□□□ 0.21
LINC00535-204ENST00000520513 SPDYE1Q8NFV5 336 aaPredicted RBP16.38■□□□□ 0.21
LINC00535-204ENST00000520513 CLEC11AQ9Y240 323 aa16.37■□□□□ 0.21
LINC00535-204ENST00000520513 PROM2Q8N271 834 aa16.15■□□□□ 0.18
LINC00535-204ENST00000520513 PRKAR2AP13861 404 aaKnown RBP16.14■□□□□ 0.17
LINC00535-204ENST00000520513 PRR29P0C7W0 189 aa16.13■□□□□ 0.17
LINC00535-204ENST00000520513 CHADLQ6NUI6 762 aa16.12■□□□□ 0.17
LINC00535-204ENST00000520513 FKBP8Q14318 412 aa16.03■□□□□ 0.16
LINC00535-204ENST00000520513 STAG3Q9UJ98 1225 aa16■□□□□ 0.15
LINC00535-204ENST00000520513 EVX2Q03828 476 aa15.97■□□□□ 0.15
LINC00535-204ENST00000520513 CREBZFQ9NS37 354 aa15.94■□□□□ 0.14
LINC00535-204ENST00000520513 HAX1O00165 279 aa15.93■□□□□ 0.14
LINC00535-204ENST00000520513 SP7Q8TDD2 431 aaPredicted RBP15.87■□□□□ 0.13
LINC00535-204ENST00000520513 FARP1Q9Y4F1 1045 aaPredicted RBP15.86■□□□□ 0.13
LINC00535-204ENST00000520513 C19orf67A6NJJ6 358 aa15.83■□□□□ 0.12
LINC00535-204ENST00000520513 MNX1P50219 401 aaPredicted RBP15.77■□□□□ 0.12
LINC00535-204ENST00000520513 CD44P16070 742 aaKnown RBP15.64■□□□□ 0.09
LINC00535-204ENST00000520513 MIER1Q8N108 512 aa15.57■□□□□ 0.08
LINC00535-204ENST00000520513 NPM1P06748 294 aaKnown RBP eCLIP15.51■□□□□ 0.07
LINC00535-204ENST00000520513 GABBR2O75899 941 aa15.5■□□□□ 0.07
LINC00535-204ENST00000520513 ZRANB1Q9UGI0 708 aa15.49■□□□□ 0.07
LINC00535-204ENST00000520513 PLCD3Q8N3E9 789 aa15.46■□□□□ 0.07
LINC00535-204ENST00000520513 PLEKHG5O94827 1062 aa15.45■□□□□ 0.06
LINC00535-204ENST00000520513 ZNF579Q8NAF0 562 aaKnown RBP15.43■□□□□ 0.06
LINC00535-204ENST00000520513 FBXO3Q9UK99 471 aa15.43■□□□□ 0.06
LINC00535-204ENST00000520513 CLCN6P51797 869 aa15.41■□□□□ 0.06
LINC00535-204ENST00000520513 PAK3O75914 559 aaPredicted RBP15.4■□□□□ 0.06
LINC00535-204ENST00000520513 RASEFQ8IZ41 740 aa15.38■□□□□ 0.05
LINC00535-204ENST00000520513 PHF12Q96QT6 1004 aa15.38■□□□□ 0.05
LINC00535-204ENST00000520513 VASPP50552 380 aaPredicted RBP15.37■□□□□ 0.05
LINC00535-204ENST00000520513 TSPYL2Q9H2G4 693 aaPredicted RBP15.34■□□□□ 0.05
LINC00535-204ENST00000520513 NUBP1P53384 320 aa15.32■□□□□ 0.04
LINC00535-204ENST00000520513 GALR2O43603 387 aaPredicted RBP15.29■□□□□ 0.04
LINC00535-204ENST00000520513 CCDC61Q9Y6R9 512 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms