Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 Y_RNA.419-201ENST00000384041 102 ntBASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 MTCYBP36-201ENST00000404146 440 ntBASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 RN7SKP229-201ENST00000410465 302 ntBASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 AC004987.3-201ENST00000413879 771 ntBASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 RPS3AP9-201ENST00000417027 792 ntBASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 PTP4A1P1-201ENST00000420539 515 ntBASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 AL035660.1-201ENST00000422041 222 ntBASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 RPL12P12-201ENST00000424633 501 ntBASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 AC234064.1-201ENST00000436312 247 ntBASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 HMGB3P9-201ENST00000441799 583 ntBASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 AL445466.1-201ENST00000448432 357 ntBASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 AP006222.1-205ENST00000450734 457 ntBASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 AL033528.1-201ENST00000453780 140 ntBASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 RPL7AP52-201ENST00000458096 790 ntBASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 FAM172BP-201ENST00000487497 1089 ntBASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 AC026427.2-201ENST00000506228 536 ntBASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 MTCO2P4-201ENST00000517968 247 ntBASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 RPA2P3-201ENST00000533268 770 ntBASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 AC010547.7-201ENST00000570323 333 ntBASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 NPIPB1P-202ENST00000588786 828 ntBASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 AL713922.2-201ENST00000619384 716 ntBASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.37□□□□□ -1.39
SHKBP1Q8TBC3 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
SHKBP1Q8TBC3 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SHKBP1Q8TBC3 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SHKBP1Q8TBC3 MT-RNR2-201ENST00000387347 1559 ntBASIC6.36□□□□□ -1.39
SHKBP1Q8TBC3 MTCO1P11-201ENST00000429111 1528 ntBASIC6.36□□□□□ -1.39
SHKBP1Q8TBC3 MTCO1P9-201ENST00000505577 1534 ntBASIC6.36□□□□□ -1.39
SHKBP1Q8TBC3 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
SHKBP1Q8TBC3 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.36□□□□□ -1.39
SHKBP1Q8TBC3 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
SHKBP1Q8TBC3 OR4G11P-202ENST00000642116 1414 ntBASIC6.36□□□□□ -1.39
SHKBP1Q8TBC3 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.36□□□□□ -1.39
SHKBP1Q8TBC3 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SHKBP1Q8TBC3 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SHKBP1Q8TBC3 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SHKBP1Q8TBC3 Y_RNA.138-201ENST00000363462 102 ntBASIC6.36□□□□□ -1.39
SHKBP1Q8TBC3 Y_RNA.144-201ENST00000363521 113 ntBASIC6.36□□□□□ -1.39
SHKBP1Q8TBC3 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SHKBP1Q8TBC3 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6.36□□□□□ -1.39
SHKBP1Q8TBC3 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.36□□□□□ -1.39
SHKBP1Q8TBC3 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SHKBP1Q8TBC3 RNA5SP178-201ENST00000410380 128 ntBASIC6.36□□□□□ -1.39
SHKBP1Q8TBC3 AC116036.1-201ENST00000412199 367 ntBASIC6.36□□□□□ -1.39
SHKBP1Q8TBC3 RPL35AP3-201ENST00000414680 288 ntBASIC6.36□□□□□ -1.39
SHKBP1Q8TBC3 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.36□□□□□ -1.39
SHKBP1Q8TBC3 USP9YP13-201ENST00000417797 480 ntBASIC6.36□□□□□ -1.39
SHKBP1Q8TBC3 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC6.36□□□□□ -1.39
SHKBP1Q8TBC3 AC079355.1-201ENST00000421770 223 ntBASIC6.36□□□□□ -1.39
SHKBP1Q8TBC3 AC245884.2-201ENST00000426257 404 ntBASIC6.36□□□□□ -1.39
SHKBP1Q8TBC3 AL009174.1-201ENST00000426577 416 ntBASIC6.36□□□□□ -1.39
SHKBP1Q8TBC3 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC6.36□□□□□ -1.39
SHKBP1Q8TBC3 YWHAEP5-201ENST00000431545 765 ntBASIC6.36□□□□□ -1.39
SHKBP1Q8TBC3 BX679664.2-201ENST00000439282 283 ntBASIC6.36□□□□□ -1.39
SHKBP1Q8TBC3 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC6.36□□□□□ -1.39
SHKBP1Q8TBC3 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.36□□□□□ -1.39
SHKBP1Q8TBC3 HMGN1P36-201ENST00000446623 298 ntBASIC6.36□□□□□ -1.39
SHKBP1Q8TBC3 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.36□□□□□ -1.39
SHKBP1Q8TBC3 OFD1P4Y-201ENST00000455273 1179 ntBASIC6.36□□□□□ -1.39
SHKBP1Q8TBC3 SLC25A51P1-201ENST00000468432 871 ntBASIC6.36□□□□□ -1.39
SHKBP1Q8TBC3 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC6.36□□□□□ -1.39
SHKBP1Q8TBC3 AC105914.1-201ENST00000511798 226 ntBASIC6.36□□□□□ -1.39
SHKBP1Q8TBC3 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC6.36□□□□□ -1.39
SHKBP1Q8TBC3 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC6.36□□□□□ -1.39
SHKBP1Q8TBC3 AP002748.2-201ENST00000528671 348 ntBASIC6.36□□□□□ -1.39
SHKBP1Q8TBC3 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC6.36□□□□□ -1.39
SHKBP1Q8TBC3 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
SHKBP1Q8TBC3 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC6.36□□□□□ -1.39
SHKBP1Q8TBC3 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC6.36□□□□□ -1.39
SHKBP1Q8TBC3 ATP5F1P7-201ENST00000567330 760 ntBASIC6.36□□□□□ -1.39
SHKBP1Q8TBC3 MIR3189-201ENST00000578735 73 ntBASIC6.36□□□□□ -1.39
SHKBP1Q8TBC3 RNU4ATAC-201ENST00000580972 127 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms