Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
SCN2BO60939 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.16□□□□□ -1.74
SCN2BO60939 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SCN2BO60939 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
SCN2BO60939 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
SCN2BO60939 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SCN2BO60939 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
SCN2BO60939 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
SCN2BO60939 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SCN2BO60939 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
SCN2BO60939 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SCN2BO60939 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SCN2BO60939 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
SCN2BO60939 AL133412.1-201ENST00000380194 2992 ntBASIC4.15□□□□□ -1.74
SCN2BO60939 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.15□□□□□ -1.74
SCN2BO60939 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
SCN2BO60939 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.15□□□□□ -1.74
SCN2BO60939 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
SCN2BO60939 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
SCN2BO60939 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SCN2BO60939 RNU1-130P-201ENST00000363930 160 ntBASIC4.15□□□□□ -1.75
SCN2BO60939 MIR3065-201ENST00000390137 79 ntBASIC4.15□□□□□ -1.75
SCN2BO60939 SNORD66.1-201ENST00000391230 76 ntBASIC4.15□□□□□ -1.75
SCN2BO60939 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.15□□□□□ -1.75
SCN2BO60939 TRGV6-201ENST00000417928 299 ntBASIC4.15□□□□□ -1.75
SCN2BO60939 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.15□□□□□ -1.75
SCN2BO60939 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.15□□□□□ -1.75
SCN2BO60939 AC073464.3-201ENST00000422564 712 ntBASIC4.15□□□□□ -1.75
SCN2BO60939 MTCO3P21-201ENST00000430791 643 ntBASIC4.15□□□□□ -1.75
SCN2BO60939 CACYBPP1-201ENST00000438592 684 ntBASIC4.15□□□□□ -1.75
SCN2BO60939 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.15□□□□□ -1.75
SCN2BO60939 CALM1P2-201ENST00000452941 448 ntBASIC4.15□□□□□ -1.75
SCN2BO60939 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.15□□□□□ -1.75
SCN2BO60939 RNU6-1218P-201ENST00000458990 108 ntBASIC4.15□□□□□ -1.75
SCN2BO60939 RPL35AP28-201ENST00000459730 331 ntBASIC4.15□□□□□ -1.75
SCN2BO60939 RPS27AP17-201ENST00000463344 455 ntBASIC4.15□□□□□ -1.75
SCN2BO60939 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.15□□□□□ -1.75
SCN2BO60939 PPM1AP1-201ENST00000502740 1135 ntBASIC4.15□□□□□ -1.75
SCN2BO60939 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.15□□□□□ -1.75
SCN2BO60939 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.15□□□□□ -1.75
SCN2BO60939 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.15□□□□□ -1.75
SCN2BO60939 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.15□□□□□ -1.75
SCN2BO60939 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SCN2BO60939 AC087888.1-201ENST00000550884 1254 ntBASIC4.15□□□□□ -1.75
SCN2BO60939 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.15□□□□□ -1.75
SCN2BO60939 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SCN2BO60939 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SCN2BO60939 PSMA6P4-201ENST00000603247 718 ntBASIC4.15□□□□□ -1.75
SCN2BO60939 AL031666.3-201ENST00000609320 1006 ntBASIC4.15□□□□□ -1.75
SCN2BO60939 Mico1.1-201ENST00000611698 204 ntBASIC4.15□□□□□ -1.75
SCN2BO60939 AL049539.1-201ENST00000611964 459 ntBASIC4.15□□□□□ -1.75
SCN2BO60939 AC009318.3-201ENST00000616916 503 ntBASIC4.15□□□□□ -1.75
SCN2BO60939 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.15□□□□□ -1.75
SCN2BO60939 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
SCN2BO60939 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.15□□□□□ -1.75
SCN2BO60939 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SCN2BO60939 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.15□□□□□ -1.75
SCN2BO60939 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
SCN2BO60939 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.14□□□□□ -1.75
SCN2BO60939 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
SCN2BO60939 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
SCN2BO60939 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.14□□□□□ -1.75
SCN2BO60939 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.14□□□□□ -1.75
SCN2BO60939 PNPT1P2-201ENST00000456768 2050 ntBASIC4.14□□□□□ -1.75
SCN2BO60939 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SCN2BO60939 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
SCN2BO60939 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
SCN2BO60939 SNORA58B-201ENST00000364259 136 ntBASIC4.14□□□□□ -1.75
SCN2BO60939 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SCN2BO60939 AL034403.1-201ENST00000399414 885 ntBASIC4.14□□□□□ -1.75
SCN2BO60939 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.14□□□□□ -1.75
SCN2BO60939 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.14□□□□□ -1.75
SCN2BO60939 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.14□□□□□ -1.75
SCN2BO60939 AC073069.1-201ENST00000428657 441 ntBASIC4.14□□□□□ -1.75
SCN2BO60939 PRELID3BP10-201ENST00000431957 584 ntBASIC4.14□□□□□ -1.75
SCN2BO60939 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.14□□□□□ -1.75
SCN2BO60939 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.14□□□□□ -1.75
SCN2BO60939 RPL7AP52-201ENST00000458096 790 ntBASIC4.14□□□□□ -1.75
SCN2BO60939 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SCN2BO60939 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.14□□□□□ -1.75
SCN2BO60939 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.14□□□□□ -1.75
SCN2BO60939 OR5M7P-201ENST00000526140 972 ntBASIC4.14□□□□□ -1.75
SCN2BO60939 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SCN2BO60939 OR5D15P-201ENST00000531671 942 ntBASIC4.14□□□□□ -1.75
SCN2BO60939 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.14□□□□□ -1.75
SCN2BO60939 CYP4A43P-201ENST00000568156 121 ntBASIC4.14□□□□□ -1.75
SCN2BO60939 AP001160.4-201ENST00000596971 382 ntBASIC4.14□□□□□ -1.75
SCN2BO60939 AC079587.1-201ENST00000603846 277 ntBASIC4.14□□□□□ -1.75
SCN2BO60939 AC115286.1-201ENST00000604298 434 ntBASIC4.14□□□□□ -1.75
SCN2BO60939 AC007423.1-201ENST00000605009 627 ntBASIC4.14□□□□□ -1.75
SCN2BO60939 AC024940.4-201ENST00000605507 246 ntBASIC4.14□□□□□ -1.75
SCN2BO60939 AC100847.1-201ENST00000611316 481 ntBASIC4.14□□□□□ -1.75
SCN2BO60939 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SCN2BO60939 AC074276.2-201ENST00000619891 348 ntBASIC4.14□□□□□ -1.75
SCN2BO60939 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
SCN2BO60939 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SCN2BO60939 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SCN2BO60939 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.14□□□□□ -1.75
SCN2BO60939 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.14□□□□□ -1.75
SCN2BO60939 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 141.1 ms