Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PTPN6P29350 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTPN6P29350 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.44□□□□□ -1.7
PTPN6P29350 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
PTPN6P29350 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PTPN6P29350 SCN1A-220ENST00000641603 12506 ntBASIC4.44□□□□□ -1.7
PTPN6P29350 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTPN6P29350 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PTPN6P29350 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTPN6P29350 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTPN6P29350 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTPN6P29350 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
PTPN6P29350 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTPN6P29350 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.43□□□□□ -1.7
PTPN6P29350 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
PTPN6P29350 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PTPN6P29350 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PTPN6P29350 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTPN6P29350 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.43□□□□□ -1.7
PTPN6P29350 IL6STP1-201ENST00000346911 1020 ntBASIC4.43□□□□□ -1.7
PTPN6P29350 RNA5SP191-201ENST00000362585 102 ntBASIC4.43□□□□□ -1.7
PTPN6P29350 RNU4-31P-201ENST00000384211 141 ntBASIC4.43□□□□□ -1.7
PTPN6P29350 RPL31P52-201ENST00000407532 367 ntBASIC4.43□□□□□ -1.7
PTPN6P29350 RN7SKP167-201ENST00000411047 285 ntBASIC4.43□□□□□ -1.7
PTPN6P29350 Y_RNA.625-201ENST00000411256 107 ntBASIC4.43□□□□□ -1.7
PTPN6P29350 MTND4LP7-201ENST00000431728 294 ntBASIC4.43□□□□□ -1.7
PTPN6P29350 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.43□□□□□ -1.7
PTPN6P29350 H2AFZP6-201ENST00000444403 394 ntBASIC4.43□□□□□ -1.7
PTPN6P29350 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.43□□□□□ -1.7
PTPN6P29350 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.43□□□□□ -1.7
PTPN6P29350 AC234781.3-201ENST00000452540 973 ntBASIC4.43□□□□□ -1.7
PTPN6P29350 SCARNA22-201ENST00000503991 125 ntBASIC4.43□□□□□ -1.7
PTPN6P29350 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.43□□□□□ -1.7
PTPN6P29350 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.43□□□□□ -1.7
PTPN6P29350 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.43□□□□□ -1.7
PTPN6P29350 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.43□□□□□ -1.7
PTPN6P29350 VTA1P2-201ENST00000520205 911 ntBASIC4.43□□□□□ -1.7
PTPN6P29350 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.43□□□□□ -1.7
PTPN6P29350 CYCSP28-201ENST00000534284 321 ntBASIC4.43□□□□□ -1.7
PTPN6P29350 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.43□□□□□ -1.7
PTPN6P29350 AL049870.4-201ENST00000555741 486 ntBASIC4.43□□□□□ -1.7
PTPN6P29350 UBE2FP2-201ENST00000566646 462 ntBASIC4.43□□□□□ -1.7
PTPN6P29350 AC021483.2-201ENST00000567415 758 ntBASIC4.43□□□□□ -1.7
PTPN6P29350 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.43□□□□□ -1.7
PTPN6P29350 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.43□□□□□ -1.7
PTPN6P29350 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.43□□□□□ -1.7
PTPN6P29350 AC242628.1-201ENST00000606810 391 ntBASIC4.43□□□□□ -1.7
PTPN6P29350 AL096803.3-201ENST00000609032 532 ntBASIC4.43□□□□□ -1.7
PTPN6P29350 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.43□□□□□ -1.7
PTPN6P29350 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
PTPN6P29350 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.43□□□□□ -1.7
PTPN6P29350 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTPN6P29350 AC007390.2-201ENST00000606229 3803 ntBASIC4.43□□□□□ -1.7
PTPN6P29350 NCLP2-201ENST00000416078 1462 ntBASIC4.43□□□□□ -1.7
PTPN6P29350 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PTPN6P29350 AC009951.1-201ENST00000623674 2614 ntBASIC4.42□□□□□ -1.7
PTPN6P29350 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.42□□□□□ -1.7
PTPN6P29350 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PTPN6P29350 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.42□□□□□ -1.7
PTPN6P29350 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PTPN6P29350 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PTPN6P29350 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.42□□□□□ -1.7
PTPN6P29350 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
PTPN6P29350 AL589826.1-201ENST00000340697 249 ntBASIC4.42□□□□□ -1.7
PTPN6P29350 RNU6-984P-201ENST00000363236 109 ntBASIC4.42□□□□□ -1.7
PTPN6P29350 RNU1-82P-201ENST00000390851 165 ntBASIC4.42□□□□□ -1.7
PTPN6P29350 VDAC1P9-201ENST00000412766 841 ntBASIC4.42□□□□□ -1.7
PTPN6P29350 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.42□□□□□ -1.7
PTPN6P29350 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.42□□□□□ -1.7
PTPN6P29350 AC004074.1-201ENST00000421810 1063 ntBASIC4.42□□□□□ -1.7
PTPN6P29350 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.42□□□□□ -1.7
PTPN6P29350 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.42□□□□□ -1.7
PTPN6P29350 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.42□□□□□ -1.7
PTPN6P29350 USP9YP9-201ENST00000429406 715 ntBASIC4.42□□□□□ -1.7
PTPN6P29350 RPS24P8-201ENST00000431490 402 ntBASIC4.42□□□□□ -1.7
PTPN6P29350 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PTPN6P29350 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.42□□□□□ -1.7
PTPN6P29350 AC108463.1-201ENST00000450258 347 ntBASIC4.42□□□□□ -1.7
PTPN6P29350 AL162388.1-201ENST00000450912 352 ntBASIC4.42□□□□□ -1.7
PTPN6P29350 AC010733.1-201ENST00000451515 401 ntBASIC4.42□□□□□ -1.7
PTPN6P29350 HMGB3P21-201ENST00000452483 547 ntBASIC4.42□□□□□ -1.7
PTPN6P29350 AC079168.2-201ENST00000453977 416 ntBASIC4.42□□□□□ -1.7
PTPN6P29350 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PTPN6P29350 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.42□□□□□ -1.7
PTPN6P29350 RPS5P7-201ENST00000456664 608 ntBASIC4.42□□□□□ -1.7
PTPN6P29350 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.42□□□□□ -1.7
PTPN6P29350 IGLV2-34-201ENST00000490007 283 ntBASIC4.42□□□□□ -1.7
PTPN6P29350 AC025164.1-201ENST00000496249 478 ntBASIC4.42□□□□□ -1.7
PTPN6P29350 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PTPN6P29350 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.42□□□□□ -1.7
PTPN6P29350 OR7H2P-201ENST00000513483 306 ntBASIC4.42□□□□□ -1.7
PTPN6P29350 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PTPN6P29350 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.42□□□□□ -1.7
PTPN6P29350 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC4.42□□□□□ -1.7
PTPN6P29350 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.42□□□□□ -1.7
PTPN6P29350 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC4.42□□□□□ -1.7
PTPN6P29350 NOP56P3-201ENST00000549457 385 ntBASIC4.42□□□□□ -1.7
PTPN6P29350 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.42□□□□□ -1.7
PTPN6P29350 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC4.42□□□□□ -1.7
PTPN6P29350 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms