Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC23.03■■□□□ 1.28
CYP46A1Q9Y6A2 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
CYP46A1Q9Y6A2 KRT18P16-201ENST00000510337 1294 ntBASIC23.03■■□□□ 1.28
CYP46A1Q9Y6A2 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CYP46A1Q9Y6A2 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
CYP46A1Q9Y6A2 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CYP46A1Q9Y6A2 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CYP46A1Q9Y6A2 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CYP46A1Q9Y6A2 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC23.02■■□□□ 1.28
CYP46A1Q9Y6A2 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CYP46A1Q9Y6A2 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CYP46A1Q9Y6A2 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
CYP46A1Q9Y6A2 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC23.02■■□□□ 1.28
CYP46A1Q9Y6A2 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC23.02■■□□□ 1.28
CYP46A1Q9Y6A2 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CYP46A1Q9Y6A2 ANKRD18DP-204ENST00000455355 1975 ntBASIC23.02■■□□□ 1.28
CYP46A1Q9Y6A2 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CYP46A1Q9Y6A2 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CYP46A1Q9Y6A2 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
CYP46A1Q9Y6A2 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CYP46A1Q9Y6A2 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CYP46A1Q9Y6A2 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
CYP46A1Q9Y6A2 ID1-201ENST00000376105 1233 ntBASIC23.02■■□□□ 1.28
CYP46A1Q9Y6A2 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC23.02■■□□□ 1.28
CYP46A1Q9Y6A2 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC23.02■■□□□ 1.28
CYP46A1Q9Y6A2 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC23.02■■□□□ 1.28
CYP46A1Q9Y6A2 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CYP46A1Q9Y6A2 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CYP46A1Q9Y6A2 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CYP46A1Q9Y6A2 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CYP46A1Q9Y6A2 TNXA-203ENST00000507684 2038 ntBASIC23.02■■□□□ 1.28
CYP46A1Q9Y6A2 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
CYP46A1Q9Y6A2 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CYP46A1Q9Y6A2 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
CYP46A1Q9Y6A2 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
CYP46A1Q9Y6A2 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC23.02■■□□□ 1.28
CYP46A1Q9Y6A2 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
CYP46A1Q9Y6A2 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
CYP46A1Q9Y6A2 LINC01465-201ENST00000408887 1940 ntBASIC23.02■■□□□ 1.28
CYP46A1Q9Y6A2 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC23.02■■□□□ 1.28
CYP46A1Q9Y6A2 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
CYP46A1Q9Y6A2 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC23.01■■□□□ 1.27
CYP46A1Q9Y6A2 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC23.01■■□□□ 1.27
CYP46A1Q9Y6A2 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CYP46A1Q9Y6A2 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CYP46A1Q9Y6A2 POM121L13P-201ENST00000422362 380 ntBASIC23.01■■□□□ 1.27
CYP46A1Q9Y6A2 APTR-205ENST00000447009 902 ntTSL 2 BASIC23.01■■□□□ 1.27
CYP46A1Q9Y6A2 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
CYP46A1Q9Y6A2 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CYP46A1Q9Y6A2 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
CYP46A1Q9Y6A2 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CYP46A1Q9Y6A2 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CYP46A1Q9Y6A2 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC23.01■■□□□ 1.27
CYP46A1Q9Y6A2 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC23.01■■□□□ 1.27
CYP46A1Q9Y6A2 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CYP46A1Q9Y6A2 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CYP46A1Q9Y6A2 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC23■■□□□ 1.27
CYP46A1Q9Y6A2 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
CYP46A1Q9Y6A2 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
CYP46A1Q9Y6A2 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CYP46A1Q9Y6A2 TEX21P-204ENST00000641479 1693 ntBASIC23■■□□□ 1.27
CYP46A1Q9Y6A2 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CYP46A1Q9Y6A2 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
CYP46A1Q9Y6A2 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CYP46A1Q9Y6A2 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CYP46A1Q9Y6A2 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC23■■□□□ 1.27
CYP46A1Q9Y6A2 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC23■■□□□ 1.27
CYP46A1Q9Y6A2 THEM4-205ENST00000489410 643 ntTSL 2 BASIC23■■□□□ 1.27
CYP46A1Q9Y6A2 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC23■■□□□ 1.27
CYP46A1Q9Y6A2 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC23■■□□□ 1.27
CYP46A1Q9Y6A2 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CYP46A1Q9Y6A2 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
CYP46A1Q9Y6A2 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CYP46A1Q9Y6A2 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CYP46A1Q9Y6A2 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CYP46A1Q9Y6A2 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
CYP46A1Q9Y6A2 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
CYP46A1Q9Y6A2 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC22.99■■□□□ 1.27
CYP46A1Q9Y6A2 AC104417.2-201ENST00000562989 1793 ntBASIC22.99■■□□□ 1.27
CYP46A1Q9Y6A2 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC22.99■■□□□ 1.27
CYP46A1Q9Y6A2 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
CYP46A1Q9Y6A2 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CYP46A1Q9Y6A2 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CYP46A1Q9Y6A2 TUBB8P6-201ENST00000436895 1288 ntBASIC22.99■■□□□ 1.27
CYP46A1Q9Y6A2 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC22.99■■□□□ 1.27
CYP46A1Q9Y6A2 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC22.99■■□□□ 1.27
CYP46A1Q9Y6A2 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CYP46A1Q9Y6A2 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC22.99■■□□□ 1.27
CYP46A1Q9Y6A2 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
CYP46A1Q9Y6A2 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CYP46A1Q9Y6A2 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CYP46A1Q9Y6A2 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC22.99■■□□□ 1.27
CYP46A1Q9Y6A2 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC22.99■■□□□ 1.27
CYP46A1Q9Y6A2 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CYP46A1Q9Y6A2 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
CYP46A1Q9Y6A2 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
CYP46A1Q9Y6A2 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
CYP46A1Q9Y6A2 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CYP46A1Q9Y6A2 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC22.98■■□□□ 1.27
CYP46A1Q9Y6A2 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms