Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SNX11Q9Y5W9 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SNX11Q9Y5W9 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX11Q9Y5W9 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SNX11Q9Y5W9 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX11Q9Y5W9 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.25■□□□□ 0.67
SNX11Q9Y5W9 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SNX11Q9Y5W9 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX11Q9Y5W9 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.25■□□□□ 0.67
SNX11Q9Y5W9 AL512408.1-201ENST00000569378 2000 ntBASIC19.25■□□□□ 0.67
SNX11Q9Y5W9 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SNX11Q9Y5W9 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SNX11Q9Y5W9 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX11Q9Y5W9 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX11Q9Y5W9 PCDHAC2-203ENST00000615316 3011 ntBASIC19.25■□□□□ 0.67
SNX11Q9Y5W9 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.24■□□□□ 0.67
SNX11Q9Y5W9 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX11Q9Y5W9 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX11Q9Y5W9 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
SNX11Q9Y5W9 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SNX11Q9Y5W9 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX11Q9Y5W9 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX11Q9Y5W9 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SNX11Q9Y5W9 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
SNX11Q9Y5W9 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
SNX11Q9Y5W9 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.24■□□□□ 0.67
SNX11Q9Y5W9 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.24■□□□□ 0.67
SNX11Q9Y5W9 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.24■□□□□ 0.67
SNX11Q9Y5W9 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
SNX11Q9Y5W9 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SNX11Q9Y5W9 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX11Q9Y5W9 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX11Q9Y5W9 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.24■□□□□ 0.67
SNX11Q9Y5W9 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.24■□□□□ 0.67
SNX11Q9Y5W9 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX11Q9Y5W9 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX11Q9Y5W9 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SNX11Q9Y5W9 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.23■□□□□ 0.67
SNX11Q9Y5W9 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SNX11Q9Y5W9 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SNX11Q9Y5W9 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
SNX11Q9Y5W9 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.23■□□□□ 0.67
SNX11Q9Y5W9 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX11Q9Y5W9 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX11Q9Y5W9 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX11Q9Y5W9 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX11Q9Y5W9 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.23■□□□□ 0.67
SNX11Q9Y5W9 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SNX11Q9Y5W9 HMGA1P5-201ENST00000412453 271 ntBASIC19.23■□□□□ 0.67
SNX11Q9Y5W9 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.23■□□□□ 0.67
SNX11Q9Y5W9 MFAP1P1-201ENST00000442257 1255 ntBASIC19.23■□□□□ 0.67
SNX11Q9Y5W9 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.23■□□□□ 0.67
SNX11Q9Y5W9 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.23■□□□□ 0.67
SNX11Q9Y5W9 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.23■□□□□ 0.67
SNX11Q9Y5W9 AC022616.7-201ENST00000525383 220 ntBASIC19.23■□□□□ 0.67
SNX11Q9Y5W9 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.23■□□□□ 0.67
SNX11Q9Y5W9 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
SNX11Q9Y5W9 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SNX11Q9Y5W9 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.23■□□□□ 0.67
SNX11Q9Y5W9 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX11Q9Y5W9 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX11Q9Y5W9 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SNX11Q9Y5W9 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SNX11Q9Y5W9 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX11Q9Y5W9 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX11Q9Y5W9 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.22■□□□□ 0.67
SNX11Q9Y5W9 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.22■□□□□ 0.67
SNX11Q9Y5W9 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SNX11Q9Y5W9 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX11Q9Y5W9 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX11Q9Y5W9 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX11Q9Y5W9 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.22■□□□□ 0.67
SNX11Q9Y5W9 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX11Q9Y5W9 AC117947.1-201ENST00000427448 529 ntBASIC19.22■□□□□ 0.67
SNX11Q9Y5W9 FAM207BP-201ENST00000447172 505 ntBASIC19.22■□□□□ 0.67
SNX11Q9Y5W9 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX11Q9Y5W9 AC063952.2-201ENST00000498792 1227 ntBASIC19.22■□□□□ 0.67
SNX11Q9Y5W9 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
SNX11Q9Y5W9 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.22■□□□□ 0.67
SNX11Q9Y5W9 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.22■□□□□ 0.67
SNX11Q9Y5W9 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SNX11Q9Y5W9 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SNX11Q9Y5W9 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX11Q9Y5W9 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX11Q9Y5W9 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.22■□□□□ 0.67
SNX11Q9Y5W9 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX11Q9Y5W9 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SNX11Q9Y5W9 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX11Q9Y5W9 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SNX11Q9Y5W9 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNX11Q9Y5W9 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SNX11Q9Y5W9 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SNX11Q9Y5W9 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNX11Q9Y5W9 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SNX11Q9Y5W9 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNX11Q9Y5W9 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SNX11Q9Y5W9 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SNX11Q9Y5W9 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SNX11Q9Y5W9 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.21■□□□□ 0.67
SNX11Q9Y5W9 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms