Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB11Q9Y5F2 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB11Q9Y5F2 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB11Q9Y5F2 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB11Q9Y5F2 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB11Q9Y5F2 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDHB11Q9Y5F2 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB11Q9Y5F2 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHB11Q9Y5F2 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PCDHB11Q9Y5F2 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PCDHB11Q9Y5F2 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB11Q9Y5F2 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB11Q9Y5F2 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
PCDHB11Q9Y5F2 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB11Q9Y5F2 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB11Q9Y5F2 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
PCDHB11Q9Y5F2 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
PCDHB11Q9Y5F2 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB11Q9Y5F2 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
PCDHB11Q9Y5F2 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHB11Q9Y5F2 AF186192.3-201ENST00000583427 947 ntBASIC19.03■□□□□ 0.64
PCDHB11Q9Y5F2 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB11Q9Y5F2 CD177P1-201ENST00000606252 935 ntBASIC19.03■□□□□ 0.64
PCDHB11Q9Y5F2 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.03■□□□□ 0.64
PCDHB11Q9Y5F2 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHB11Q9Y5F2 AP006587.1-201ENST00000534129 1502 ntBASIC19.03■□□□□ 0.64
PCDHB11Q9Y5F2 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
PCDHB11Q9Y5F2 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHB11Q9Y5F2 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB11Q9Y5F2 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB11Q9Y5F2 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHB11Q9Y5F2 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB11Q9Y5F2 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHB11Q9Y5F2 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB11Q9Y5F2 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB11Q9Y5F2 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHB11Q9Y5F2 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
PCDHB11Q9Y5F2 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.02■□□□□ 0.64
PCDHB11Q9Y5F2 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDHB11Q9Y5F2 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB11Q9Y5F2 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
PCDHB11Q9Y5F2 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB11Q9Y5F2 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB11Q9Y5F2 TMPOP1-202ENST00000424642 1267 ntBASIC19.02■□□□□ 0.64
PCDHB11Q9Y5F2 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.02■□□□□ 0.64
PCDHB11Q9Y5F2 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
PCDHB11Q9Y5F2 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
PCDHB11Q9Y5F2 AC012306.2-201ENST00000609350 630 ntBASIC19.02■□□□□ 0.64
PCDHB11Q9Y5F2 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDHB11Q9Y5F2 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDHB11Q9Y5F2 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB11Q9Y5F2 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.02■□□□□ 0.64
PCDHB11Q9Y5F2 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB11Q9Y5F2 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB11Q9Y5F2 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.02■□□□□ 0.63
PCDHB11Q9Y5F2 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PCDHB11Q9Y5F2 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
PCDHB11Q9Y5F2 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.02■□□□□ 0.63
PCDHB11Q9Y5F2 AC125437.2-201ENST00000625180 2167 ntBASIC19.02■□□□□ 0.63
PCDHB11Q9Y5F2 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
PCDHB11Q9Y5F2 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
PCDHB11Q9Y5F2 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
PCDHB11Q9Y5F2 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB11Q9Y5F2 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB11Q9Y5F2 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB11Q9Y5F2 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB11Q9Y5F2 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB11Q9Y5F2 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
PCDHB11Q9Y5F2 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB11Q9Y5F2 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB11Q9Y5F2 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB11Q9Y5F2 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.01■□□□□ 0.63
PCDHB11Q9Y5F2 RCN1P1-201ENST00000400413 996 ntBASIC19.01■□□□□ 0.63
PCDHB11Q9Y5F2 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.01■□□□□ 0.63
PCDHB11Q9Y5F2 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB11Q9Y5F2 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.01■□□□□ 0.63
PCDHB11Q9Y5F2 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHB11Q9Y5F2 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.01■□□□□ 0.63
PCDHB11Q9Y5F2 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
PCDHB11Q9Y5F2 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
PCDHB11Q9Y5F2 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB11Q9Y5F2 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.01■□□□□ 0.63
PCDHB11Q9Y5F2 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB11Q9Y5F2 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB11Q9Y5F2 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHB11Q9Y5F2 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB11Q9Y5F2 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB11Q9Y5F2 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB11Q9Y5F2 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB11Q9Y5F2 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19■□□□□ 0.63
PCDHB11Q9Y5F2 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHB11Q9Y5F2 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB11Q9Y5F2 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PCDHB11Q9Y5F2 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19■□□□□ 0.63
PCDHB11Q9Y5F2 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB11Q9Y5F2 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
PCDHB11Q9Y5F2 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
PCDHB11Q9Y5F2 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19■□□□□ 0.63
PCDHB11Q9Y5F2 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB11Q9Y5F2 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms