Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHTOPQ9Y3Y2 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHTOPQ9Y3Y2 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHTOPQ9Y3Y2 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CHTOPQ9Y3Y2 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CHTOPQ9Y3Y2 AC061975.6-201ENST00000579045 1553 ntBASIC13.92□□□□□ -0.18
CHTOPQ9Y3Y2 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHTOPQ9Y3Y2 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CHTOPQ9Y3Y2 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC13.92□□□□□ -0.18
CHTOPQ9Y3Y2 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CHTOPQ9Y3Y2 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CHTOPQ9Y3Y2 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
CHTOPQ9Y3Y2 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHTOPQ9Y3Y2 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHTOPQ9Y3Y2 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.92□□□□□ -0.18
CHTOPQ9Y3Y2 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC13.92□□□□□ -0.18
CHTOPQ9Y3Y2 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHTOPQ9Y3Y2 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHTOPQ9Y3Y2 AK3-203ENST00000447596 705 ntTSL 2 BASIC13.92□□□□□ -0.18
CHTOPQ9Y3Y2 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC13.92□□□□□ -0.18
CHTOPQ9Y3Y2 PRTG-204ENST00000561292 833 ntTSL 3 BASIC13.92□□□□□ -0.18
CHTOPQ9Y3Y2 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHTOPQ9Y3Y2 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC13.92□□□□□ -0.18
CHTOPQ9Y3Y2 HSD17B1P1-201ENST00000590052 955 ntBASIC13.92□□□□□ -0.18
CHTOPQ9Y3Y2 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC13.92□□□□□ -0.18
CHTOPQ9Y3Y2 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC13.92□□□□□ -0.18
CHTOPQ9Y3Y2 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHTOPQ9Y3Y2 GOLGA2P11-201ENST00000562660 1621 ntBASIC13.92□□□□□ -0.18
CHTOPQ9Y3Y2 AC135050.7-201ENST00000624508 2218 ntBASIC13.92□□□□□ -0.18
CHTOPQ9Y3Y2 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHTOPQ9Y3Y2 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHTOPQ9Y3Y2 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHTOPQ9Y3Y2 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHTOPQ9Y3Y2 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHTOPQ9Y3Y2 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CHTOPQ9Y3Y2 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC13.92□□□□□ -0.18
CHTOPQ9Y3Y2 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHTOPQ9Y3Y2 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHTOPQ9Y3Y2 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHTOPQ9Y3Y2 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHTOPQ9Y3Y2 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
CHTOPQ9Y3Y2 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHTOPQ9Y3Y2 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHTOPQ9Y3Y2 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHTOPQ9Y3Y2 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
CHTOPQ9Y3Y2 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CHTOPQ9Y3Y2 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CHTOPQ9Y3Y2 AC084018.2-201ENST00000613093 2607 ntBASIC13.92□□□□□ -0.18
CHTOPQ9Y3Y2 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CHTOPQ9Y3Y2 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC13.91□□□□□ -0.18
CHTOPQ9Y3Y2 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC13.91□□□□□ -0.18
CHTOPQ9Y3Y2 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CHTOPQ9Y3Y2 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHTOPQ9Y3Y2 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CHTOPQ9Y3Y2 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC13.91□□□□□ -0.18
CHTOPQ9Y3Y2 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CHTOPQ9Y3Y2 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CHTOPQ9Y3Y2 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CHTOPQ9Y3Y2 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHTOPQ9Y3Y2 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHTOPQ9Y3Y2 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CHTOPQ9Y3Y2 AC009113.1-201ENST00000570267 2443 ntBASIC13.91□□□□□ -0.18
CHTOPQ9Y3Y2 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CHTOPQ9Y3Y2 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHTOPQ9Y3Y2 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHTOPQ9Y3Y2 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CHTOPQ9Y3Y2 AL136379.1-201ENST00000623471 2642 ntBASIC13.91□□□□□ -0.18
CHTOPQ9Y3Y2 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHTOPQ9Y3Y2 PID1-202ENST00000392054 2745 ntTSL 2 BASIC13.91□□□□□ -0.18
CHTOPQ9Y3Y2 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC13.91□□□□□ -0.18
CHTOPQ9Y3Y2 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC13.91□□□□□ -0.18
CHTOPQ9Y3Y2 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CHTOPQ9Y3Y2 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CHTOPQ9Y3Y2 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CHTOPQ9Y3Y2 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHTOPQ9Y3Y2 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CHTOPQ9Y3Y2 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHTOPQ9Y3Y2 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHTOPQ9Y3Y2 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC13.91□□□□□ -0.18
CHTOPQ9Y3Y2 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC13.91□□□□□ -0.18
CHTOPQ9Y3Y2 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHTOPQ9Y3Y2 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHTOPQ9Y3Y2 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC13.91□□□□□ -0.18
CHTOPQ9Y3Y2 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHTOPQ9Y3Y2 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CHTOPQ9Y3Y2 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CHTOPQ9Y3Y2 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC13.91□□□□□ -0.18
CHTOPQ9Y3Y2 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHTOPQ9Y3Y2 MOK-225ENST00000522867 1883 ntTSL 5 BASIC13.91□□□□□ -0.18
CHTOPQ9Y3Y2 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CHTOPQ9Y3Y2 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
CHTOPQ9Y3Y2 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC13.9□□□□□ -0.18
CHTOPQ9Y3Y2 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CHTOPQ9Y3Y2 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CHTOPQ9Y3Y2 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CHTOPQ9Y3Y2 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CHTOPQ9Y3Y2 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHTOPQ9Y3Y2 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHTOPQ9Y3Y2 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHTOPQ9Y3Y2 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms