Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBE2D4Q9Y2X8 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC13.52□□□□□ -0.25
UBE2D4Q9Y2X8 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
UBE2D4Q9Y2X8 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBE2D4Q9Y2X8 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBE2D4Q9Y2X8 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
UBE2D4Q9Y2X8 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBE2D4Q9Y2X8 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBE2D4Q9Y2X8 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBE2D4Q9Y2X8 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBE2D4Q9Y2X8 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBE2D4Q9Y2X8 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.25
UBE2D4Q9Y2X8 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBE2D4Q9Y2X8 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
UBE2D4Q9Y2X8 AC026471.1-201ENST00000564629 3026 ntBASIC13.51□□□□□ -0.25
UBE2D4Q9Y2X8 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
UBE2D4Q9Y2X8 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2D4Q9Y2X8 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC13.51□□□□□ -0.25
UBE2D4Q9Y2X8 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC13.51□□□□□ -0.25
UBE2D4Q9Y2X8 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
UBE2D4Q9Y2X8 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2D4Q9Y2X8 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2D4Q9Y2X8 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2D4Q9Y2X8 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC13.51□□□□□ -0.25
UBE2D4Q9Y2X8 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2D4Q9Y2X8 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC13.51□□□□□ -0.25
UBE2D4Q9Y2X8 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2D4Q9Y2X8 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2D4Q9Y2X8 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2D4Q9Y2X8 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2D4Q9Y2X8 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2D4Q9Y2X8 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC13.51□□□□□ -0.25
UBE2D4Q9Y2X8 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC13.51□□□□□ -0.25
UBE2D4Q9Y2X8 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2D4Q9Y2X8 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC13.51□□□□□ -0.25
UBE2D4Q9Y2X8 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
UBE2D4Q9Y2X8 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC13.51□□□□□ -0.25
UBE2D4Q9Y2X8 HCG11-201ENST00000411553 5696 ntBASIC13.51□□□□□ -0.25
UBE2D4Q9Y2X8 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2D4Q9Y2X8 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2D4Q9Y2X8 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
UBE2D4Q9Y2X8 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2D4Q9Y2X8 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2D4Q9Y2X8 AC104581.1-202ENST00000635932 2618 ntBASIC13.51□□□□□ -0.25
UBE2D4Q9Y2X8 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2D4Q9Y2X8 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2D4Q9Y2X8 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2D4Q9Y2X8 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2D4Q9Y2X8 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2D4Q9Y2X8 AC009113.1-201ENST00000570267 2443 ntBASIC13.51□□□□□ -0.25
UBE2D4Q9Y2X8 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2D4Q9Y2X8 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC13.51□□□□□ -0.25
UBE2D4Q9Y2X8 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2D4Q9Y2X8 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC13.5□□□□□ -0.25
UBE2D4Q9Y2X8 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBE2D4Q9Y2X8 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
UBE2D4Q9Y2X8 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC13.5□□□□□ -0.25
UBE2D4Q9Y2X8 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
UBE2D4Q9Y2X8 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
UBE2D4Q9Y2X8 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBE2D4Q9Y2X8 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBE2D4Q9Y2X8 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
UBE2D4Q9Y2X8 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBE2D4Q9Y2X8 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC13.5□□□□□ -0.25
UBE2D4Q9Y2X8 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBE2D4Q9Y2X8 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBE2D4Q9Y2X8 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
UBE2D4Q9Y2X8 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBE2D4Q9Y2X8 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBE2D4Q9Y2X8 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBE2D4Q9Y2X8 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBE2D4Q9Y2X8 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
UBE2D4Q9Y2X8 SPI1-203ENST00000533030 661 ntTSL 2 BASIC13.5□□□□□ -0.25
UBE2D4Q9Y2X8 DBI-210ENST00000542275 757 ntTSL 5 BASIC13.5□□□□□ -0.25
UBE2D4Q9Y2X8 C2orf69P4-201ENST00000565394 541 ntBASIC13.5□□□□□ -0.25
UBE2D4Q9Y2X8 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC13.5□□□□□ -0.25
UBE2D4Q9Y2X8 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC13.5□□□□□ -0.25
UBE2D4Q9Y2X8 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC13.5□□□□□ -0.25
UBE2D4Q9Y2X8 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
UBE2D4Q9Y2X8 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBE2D4Q9Y2X8 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBE2D4Q9Y2X8 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBE2D4Q9Y2X8 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBE2D4Q9Y2X8 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBE2D4Q9Y2X8 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
UBE2D4Q9Y2X8 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBE2D4Q9Y2X8 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBE2D4Q9Y2X8 AC116351.2-201ENST00000606540 1585 ntBASIC13.49□□□□□ -0.25
UBE2D4Q9Y2X8 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
UBE2D4Q9Y2X8 LETM1P2-201ENST00000597330 2178 ntBASIC13.49□□□□□ -0.25
UBE2D4Q9Y2X8 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2D4Q9Y2X8 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC13.49□□□□□ -0.25
UBE2D4Q9Y2X8 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2D4Q9Y2X8 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2D4Q9Y2X8 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
UBE2D4Q9Y2X8 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2D4Q9Y2X8 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC13.49□□□□□ -0.25
UBE2D4Q9Y2X8 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2D4Q9Y2X8 AC068338.2-201ENST00000563278 1430 ntBASIC13.49□□□□□ -0.25
UBE2D4Q9Y2X8 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms