Protein–RNA interactions for Protein: Q9UBU9

NXF1, Nuclear RNA export factor 1, humanhuman

Known RBP Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1Q9UBU9 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.9■□□□□ 0.94
NXF1Q9UBU9 AF186192.3-201ENST00000583427 947 ntBASIC20.9■□□□□ 0.94
NXF1Q9UBU9 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
NXF1Q9UBU9 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NXF1Q9UBU9 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
NXF1Q9UBU9 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
NXF1Q9UBU9 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.94
NXF1Q9UBU9 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
NXF1Q9UBU9 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NXF1Q9UBU9 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NXF1Q9UBU9 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NXF1Q9UBU9 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
NXF1Q9UBU9 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
NXF1Q9UBU9 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NXF1Q9UBU9 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NXF1Q9UBU9 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
NXF1Q9UBU9 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.89■□□□□ 0.93
NXF1Q9UBU9 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.89■□□□□ 0.93
NXF1Q9UBU9 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NXF1Q9UBU9 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.89■□□□□ 0.93
NXF1Q9UBU9 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.89■□□□□ 0.93
NXF1Q9UBU9 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.89■□□□□ 0.93
NXF1Q9UBU9 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NXF1Q9UBU9 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NXF1Q9UBU9 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NXF1Q9UBU9 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NXF1Q9UBU9 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NXF1Q9UBU9 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
NXF1Q9UBU9 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.89■□□□□ 0.93
NXF1Q9UBU9 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NXF1Q9UBU9 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.93
NXF1Q9UBU9 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.89■□□□□ 0.93
NXF1Q9UBU9 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NXF1Q9UBU9 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
NXF1Q9UBU9 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NXF1Q9UBU9 AL135905.2-201ENST00000584934 1404 ntBASIC20.88■□□□□ 0.93
NXF1Q9UBU9 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NXF1Q9UBU9 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NXF1Q9UBU9 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NXF1Q9UBU9 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NXF1Q9UBU9 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.88■□□□□ 0.93
NXF1Q9UBU9 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.88■□□□□ 0.93
NXF1Q9UBU9 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NXF1Q9UBU9 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NXF1Q9UBU9 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.88■□□□□ 0.93
NXF1Q9UBU9 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NXF1Q9UBU9 AL353807.1-201ENST00000427475 662 ntBASIC20.88■□□□□ 0.93
NXF1Q9UBU9 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NXF1Q9UBU9 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NXF1Q9UBU9 RPS2P4-201ENST00000476944 856 ntBASIC20.88■□□□□ 0.93
NXF1Q9UBU9 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NXF1Q9UBU9 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.88■□□□□ 0.93
NXF1Q9UBU9 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.88■□□□□ 0.93
NXF1Q9UBU9 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.88■□□□□ 0.93
NXF1Q9UBU9 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.88■□□□□ 0.93
NXF1Q9UBU9 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NXF1Q9UBU9 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
NXF1Q9UBU9 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NXF1Q9UBU9 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NXF1Q9UBU9 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NXF1Q9UBU9 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NXF1Q9UBU9 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NXF1Q9UBU9 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NXF1Q9UBU9 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NXF1Q9UBU9 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NXF1Q9UBU9 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
NXF1Q9UBU9 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.87■□□□□ 0.93
NXF1Q9UBU9 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.87■□□□□ 0.93
NXF1Q9UBU9 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.87■□□□□ 0.93
NXF1Q9UBU9 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
NXF1Q9UBU9 AC233702.5-201ENST00000584107 538 ntBASIC20.87■□□□□ 0.93
NXF1Q9UBU9 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NXF1Q9UBU9 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.87■□□□□ 0.93
NXF1Q9UBU9 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
NXF1Q9UBU9 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.87■□□□□ 0.93
NXF1Q9UBU9 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.86■□□□□ 0.93
NXF1Q9UBU9 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.86■□□□□ 0.93
NXF1Q9UBU9 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
NXF1Q9UBU9 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.86■□□□□ 0.93
NXF1Q9UBU9 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NXF1Q9UBU9 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NXF1Q9UBU9 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
NXF1Q9UBU9 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NXF1Q9UBU9 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
NXF1Q9UBU9 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.86■□□□□ 0.93
NXF1Q9UBU9 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NXF1Q9UBU9 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
NXF1Q9UBU9 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
NXF1Q9UBU9 MIR718-201ENST00000390190 70 ntBASIC20.86■□□□□ 0.93
NXF1Q9UBU9 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NXF1Q9UBU9 AC012618.2-201ENST00000428058 849 ntBASIC20.86■□□□□ 0.93
NXF1Q9UBU9 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.86■□□□□ 0.93
NXF1Q9UBU9 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.86■□□□□ 0.93
NXF1Q9UBU9 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.86■□□□□ 0.93
NXF1Q9UBU9 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NXF1Q9UBU9 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.86■□□□□ 0.93
NXF1Q9UBU9 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
NXF1Q9UBU9 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NXF1Q9UBU9 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
NXF1Q9UBU9 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms