Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00474Q9P2X8 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC12.64□□□□□ -0.39
LINC00474Q9P2X8 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00474Q9P2X8 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC00474Q9P2X8 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00474Q9P2X8 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00474Q9P2X8 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00474Q9P2X8 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
LINC00474Q9P2X8 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC12.64□□□□□ -0.39
LINC00474Q9P2X8 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00474Q9P2X8 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00474Q9P2X8 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00474Q9P2X8 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00474Q9P2X8 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00474Q9P2X8 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00474Q9P2X8 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00474Q9P2X8 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00474Q9P2X8 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00474Q9P2X8 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC12.64□□□□□ -0.39
LINC00474Q9P2X8 HES2-206ENST00000489730 730 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC00474Q9P2X8 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC12.64□□□□□ -0.39
LINC00474Q9P2X8 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC12.64□□□□□ -0.39
LINC00474Q9P2X8 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC12.64□□□□□ -0.39
LINC00474Q9P2X8 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC12.64□□□□□ -0.39
LINC00474Q9P2X8 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
LINC00474Q9P2X8 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC12.64□□□□□ -0.39
LINC00474Q9P2X8 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
LINC00474Q9P2X8 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC12.64□□□□□ -0.39
LINC00474Q9P2X8 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC00474Q9P2X8 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC12.64□□□□□ -0.39
LINC00474Q9P2X8 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00474Q9P2X8 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
LINC00474Q9P2X8 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00474Q9P2X8 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00474Q9P2X8 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00474Q9P2X8 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00474Q9P2X8 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
LINC00474Q9P2X8 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC00474Q9P2X8 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00474Q9P2X8 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
LINC00474Q9P2X8 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00474Q9P2X8 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00474Q9P2X8 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00474Q9P2X8 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC12.63□□□□□ -0.39
LINC00474Q9P2X8 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
LINC00474Q9P2X8 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00474Q9P2X8 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00474Q9P2X8 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00474Q9P2X8 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC12.63□□□□□ -0.39
LINC00474Q9P2X8 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
LINC00474Q9P2X8 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00474Q9P2X8 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
LINC00474Q9P2X8 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC12.63□□□□□ -0.39
LINC00474Q9P2X8 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00474Q9P2X8 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC00474Q9P2X8 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC00474Q9P2X8 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00474Q9P2X8 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00474Q9P2X8 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
LINC00474Q9P2X8 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00474Q9P2X8 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00474Q9P2X8 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00474Q9P2X8 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00474Q9P2X8 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
LINC00474Q9P2X8 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
LINC00474Q9P2X8 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00474Q9P2X8 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC12.63□□□□□ -0.39
LINC00474Q9P2X8 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00474Q9P2X8 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00474Q9P2X8 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
LINC00474Q9P2X8 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
LINC00474Q9P2X8 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC00474Q9P2X8 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00474Q9P2X8 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00474Q9P2X8 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00474Q9P2X8 MOK-225ENST00000522867 1883 ntTSL 5 BASIC12.63□□□□□ -0.39
LINC00474Q9P2X8 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00474Q9P2X8 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
LINC00474Q9P2X8 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC12.63□□□□□ -0.39
LINC00474Q9P2X8 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00474Q9P2X8 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC00474Q9P2X8 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC00474Q9P2X8 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC00474Q9P2X8 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
LINC00474Q9P2X8 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00474Q9P2X8 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
LINC00474Q9P2X8 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00474Q9P2X8 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00474Q9P2X8 AC099778.1-201ENST00000568593 1911 ntBASIC12.62□□□□□ -0.39
LINC00474Q9P2X8 USP39-204ENST00000409766 2033 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC00474Q9P2X8 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00474Q9P2X8 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC12.62□□□□□ -0.39
LINC00474Q9P2X8 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
LINC00474Q9P2X8 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00474Q9P2X8 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00474Q9P2X8 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
LINC00474Q9P2X8 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00474Q9P2X8 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC00474Q9P2X8 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00474Q9P2X8 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms