Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.36■□□□□ 0.53
VAPAQ9P0L0 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VAPAQ9P0L0 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VAPAQ9P0L0 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
VAPAQ9P0L0 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
VAPAQ9P0L0 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
VAPAQ9P0L0 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.35■□□□□ 0.53
VAPAQ9P0L0 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VAPAQ9P0L0 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VAPAQ9P0L0 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.35■□□□□ 0.53
VAPAQ9P0L0 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
VAPAQ9P0L0 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
VAPAQ9P0L0 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VAPAQ9P0L0 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.35■□□□□ 0.53
VAPAQ9P0L0 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.35■□□□□ 0.53
VAPAQ9P0L0 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VAPAQ9P0L0 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VAPAQ9P0L0 AC007613.1-201ENST00000572811 2597 ntBASIC18.35■□□□□ 0.53
VAPAQ9P0L0 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VAPAQ9P0L0 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VAPAQ9P0L0 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VAPAQ9P0L0 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.35■□□□□ 0.53
VAPAQ9P0L0 AC133552.2-202ENST00000575694 574 ntBASIC18.35■□□□□ 0.53
VAPAQ9P0L0 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.35■□□□□ 0.53
VAPAQ9P0L0 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
VAPAQ9P0L0 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
VAPAQ9P0L0 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.35■□□□□ 0.53
VAPAQ9P0L0 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
VAPAQ9P0L0 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.35■□□□□ 0.53
VAPAQ9P0L0 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
VAPAQ9P0L0 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
VAPAQ9P0L0 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
VAPAQ9P0L0 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.35■□□□□ 0.53
VAPAQ9P0L0 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.35■□□□□ 0.53
VAPAQ9P0L0 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VAPAQ9P0L0 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.34■□□□□ 0.53
VAPAQ9P0L0 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.34■□□□□ 0.53
VAPAQ9P0L0 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VAPAQ9P0L0 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VAPAQ9P0L0 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
VAPAQ9P0L0 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
VAPAQ9P0L0 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
VAPAQ9P0L0 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.34■□□□□ 0.53
VAPAQ9P0L0 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
VAPAQ9P0L0 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
VAPAQ9P0L0 AC009113.1-201ENST00000570267 2443 ntBASIC18.34■□□□□ 0.53
VAPAQ9P0L0 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VAPAQ9P0L0 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.34■□□□□ 0.53
VAPAQ9P0L0 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
VAPAQ9P0L0 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
VAPAQ9P0L0 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VAPAQ9P0L0 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VAPAQ9P0L0 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.34■□□□□ 0.53
VAPAQ9P0L0 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.33■□□□□ 0.53
VAPAQ9P0L0 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VAPAQ9P0L0 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
VAPAQ9P0L0 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.33■□□□□ 0.53
VAPAQ9P0L0 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VAPAQ9P0L0 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VAPAQ9P0L0 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VAPAQ9P0L0 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
VAPAQ9P0L0 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
VAPAQ9P0L0 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
VAPAQ9P0L0 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VAPAQ9P0L0 AL162430.1-201ENST00000480705 870 ntBASIC18.33■□□□□ 0.52
VAPAQ9P0L0 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
VAPAQ9P0L0 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
VAPAQ9P0L0 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
VAPAQ9P0L0 RARRES2P6-201ENST00000567333 442 ntBASIC18.33■□□□□ 0.52
VAPAQ9P0L0 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
VAPAQ9P0L0 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VAPAQ9P0L0 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VAPAQ9P0L0 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VAPAQ9P0L0 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
VAPAQ9P0L0 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VAPAQ9P0L0 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
VAPAQ9P0L0 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
VAPAQ9P0L0 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VAPAQ9P0L0 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.33■□□□□ 0.52
VAPAQ9P0L0 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.32■□□□□ 0.52
VAPAQ9P0L0 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
VAPAQ9P0L0 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
VAPAQ9P0L0 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
VAPAQ9P0L0 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.32■□□□□ 0.52
VAPAQ9P0L0 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VAPAQ9P0L0 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
VAPAQ9P0L0 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VAPAQ9P0L0 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.32■□□□□ 0.52
VAPAQ9P0L0 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
VAPAQ9P0L0 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
VAPAQ9P0L0 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.32■□□□□ 0.52
VAPAQ9P0L0 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.32■□□□□ 0.52
VAPAQ9P0L0 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
VAPAQ9P0L0 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.32■□□□□ 0.52
VAPAQ9P0L0 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.32■□□□□ 0.52
VAPAQ9P0L0 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
VAPAQ9P0L0 AC073210.2-201ENST00000430369 194 ntBASIC18.32■□□□□ 0.52
VAPAQ9P0L0 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.32■□□□□ 0.52
VAPAQ9P0L0 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.32■□□□□ 0.52
VAPAQ9P0L0 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms