Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HPF1Q9NWY4 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HPF1Q9NWY4 AL691432.2-201ENST00000607222 2038 ntBASIC18.01■□□□□ 0.47
HPF1Q9NWY4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
HPF1Q9NWY4 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.01■□□□□ 0.47
HPF1Q9NWY4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
HPF1Q9NWY4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
HPF1Q9NWY4 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18■□□□□ 0.47
HPF1Q9NWY4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
HPF1Q9NWY4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18■□□□□ 0.47
HPF1Q9NWY4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HPF1Q9NWY4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HPF1Q9NWY4 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18■□□□□ 0.47
HPF1Q9NWY4 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HPF1Q9NWY4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HPF1Q9NWY4 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HPF1Q9NWY4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
HPF1Q9NWY4 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HPF1Q9NWY4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18■□□□□ 0.47
HPF1Q9NWY4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18■□□□□ 0.47
HPF1Q9NWY4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18■□□□□ 0.47
HPF1Q9NWY4 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18■□□□□ 0.47
HPF1Q9NWY4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18■□□□□ 0.47
HPF1Q9NWY4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18■□□□□ 0.47
HPF1Q9NWY4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18■□□□□ 0.47
HPF1Q9NWY4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
HPF1Q9NWY4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18■□□□□ 0.47
HPF1Q9NWY4 TMEM179-206ENST00000616017 1645 ntBASIC18■□□□□ 0.47
HPF1Q9NWY4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
HPF1Q9NWY4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18■□□□□ 0.47
HPF1Q9NWY4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18■□□□□ 0.47
HPF1Q9NWY4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HPF1Q9NWY4 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HPF1Q9NWY4 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
HPF1Q9NWY4 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HPF1Q9NWY4 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18■□□□□ 0.47
HPF1Q9NWY4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18■□□□□ 0.47
HPF1Q9NWY4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18■□□□□ 0.47
HPF1Q9NWY4 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HPF1Q9NWY4 AL157384.1-201ENST00000445995 2473 ntBASIC17.99■□□□□ 0.47
HPF1Q9NWY4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HPF1Q9NWY4 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HPF1Q9NWY4 KRT16P1-201ENST00000399124 1418 ntBASIC17.99■□□□□ 0.47
HPF1Q9NWY4 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HPF1Q9NWY4 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.99■□□□□ 0.47
HPF1Q9NWY4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HPF1Q9NWY4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HPF1Q9NWY4 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.99■□□□□ 0.47
HPF1Q9NWY4 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
HPF1Q9NWY4 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
HPF1Q9NWY4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.99■□□□□ 0.47
HPF1Q9NWY4 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.99■□□□□ 0.47
HPF1Q9NWY4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
HPF1Q9NWY4 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.99■□□□□ 0.47
HPF1Q9NWY4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HPF1Q9NWY4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HPF1Q9NWY4 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
HPF1Q9NWY4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HPF1Q9NWY4 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HPF1Q9NWY4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HPF1Q9NWY4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HPF1Q9NWY4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
HPF1Q9NWY4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HPF1Q9NWY4 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HPF1Q9NWY4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HPF1Q9NWY4 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HPF1Q9NWY4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HPF1Q9NWY4 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.98■□□□□ 0.47
HPF1Q9NWY4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.98■□□□□ 0.47
HPF1Q9NWY4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HPF1Q9NWY4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HPF1Q9NWY4 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HPF1Q9NWY4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.98■□□□□ 0.47
HPF1Q9NWY4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.98■□□□□ 0.47
HPF1Q9NWY4 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HPF1Q9NWY4 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.98■□□□□ 0.47
HPF1Q9NWY4 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.98■□□□□ 0.47
HPF1Q9NWY4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.98■□□□□ 0.47
HPF1Q9NWY4 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HPF1Q9NWY4 AP003071.4-201ENST00000562276 1284 ntBASIC17.98■□□□□ 0.47
HPF1Q9NWY4 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.98■□□□□ 0.47
HPF1Q9NWY4 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HPF1Q9NWY4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
HPF1Q9NWY4 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HPF1Q9NWY4 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
HPF1Q9NWY4 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HPF1Q9NWY4 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HPF1Q9NWY4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HPF1Q9NWY4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
HPF1Q9NWY4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.97■□□□□ 0.47
HPF1Q9NWY4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HPF1Q9NWY4 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HPF1Q9NWY4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.97■□□□□ 0.47
HPF1Q9NWY4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.97■□□□□ 0.47
HPF1Q9NWY4 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.97■□□□□ 0.47
HPF1Q9NWY4 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.97■□□□□ 0.47
HPF1Q9NWY4 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HPF1Q9NWY4 AC099778.1-201ENST00000568593 1911 ntBASIC17.97■□□□□ 0.47
HPF1Q9NWY4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HPF1Q9NWY4 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms