Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 NTF6B-201ENST00000591913 560 ntBASIC20.09■□□□□ 0.81
HPS4Q9NQG7 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
HPS4Q9NQG7 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.09■□□□□ 0.81
HPS4Q9NQG7 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HPS4Q9NQG7 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
HPS4Q9NQG7 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.09■□□□□ 0.81
HPS4Q9NQG7 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.09■□□□□ 0.81
HPS4Q9NQG7 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HPS4Q9NQG7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HPS4Q9NQG7 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HPS4Q9NQG7 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
HPS4Q9NQG7 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
HPS4Q9NQG7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.09■□□□□ 0.81
HPS4Q9NQG7 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.09■□□□□ 0.81
HPS4Q9NQG7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.09■□□□□ 0.81
HPS4Q9NQG7 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
HPS4Q9NQG7 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HPS4Q9NQG7 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
HPS4Q9NQG7 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HPS4Q9NQG7 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.08■□□□□ 0.81
HPS4Q9NQG7 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HPS4Q9NQG7 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
HPS4Q9NQG7 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.08■□□□□ 0.81
HPS4Q9NQG7 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
HPS4Q9NQG7 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HPS4Q9NQG7 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.08■□□□□ 0.81
HPS4Q9NQG7 AC004951.3-201ENST00000418645 1148 ntBASIC20.08■□□□□ 0.81
HPS4Q9NQG7 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.08■□□□□ 0.81
HPS4Q9NQG7 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.08■□□□□ 0.81
HPS4Q9NQG7 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.08■□□□□ 0.81
HPS4Q9NQG7 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
HPS4Q9NQG7 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
HPS4Q9NQG7 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.08■□□□□ 0.8
HPS4Q9NQG7 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
HPS4Q9NQG7 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.08■□□□□ 0.8
HPS4Q9NQG7 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
HPS4Q9NQG7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HPS4Q9NQG7 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.08■□□□□ 0.8
HPS4Q9NQG7 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HPS4Q9NQG7 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
HPS4Q9NQG7 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HPS4Q9NQG7 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HPS4Q9NQG7 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
HPS4Q9NQG7 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.07■□□□□ 0.8
HPS4Q9NQG7 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HPS4Q9NQG7 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
HPS4Q9NQG7 LIN28AP1-201ENST00000429574 405 ntBASIC20.07■□□□□ 0.8
HPS4Q9NQG7 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.07■□□□□ 0.8
HPS4Q9NQG7 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.07■□□□□ 0.8
HPS4Q9NQG7 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.07■□□□□ 0.8
HPS4Q9NQG7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HPS4Q9NQG7 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
HPS4Q9NQG7 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
HPS4Q9NQG7 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.07■□□□□ 0.8
HPS4Q9NQG7 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HPS4Q9NQG7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.06■□□□□ 0.8
HPS4Q9NQG7 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.06■□□□□ 0.8
HPS4Q9NQG7 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HPS4Q9NQG7 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
HPS4Q9NQG7 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HPS4Q9NQG7 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.06■□□□□ 0.8
HPS4Q9NQG7 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HPS4Q9NQG7 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.06■□□□□ 0.8
HPS4Q9NQG7 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HPS4Q9NQG7 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
HPS4Q9NQG7 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
HPS4Q9NQG7 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
HPS4Q9NQG7 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HPS4Q9NQG7 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HPS4Q9NQG7 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
HPS4Q9NQG7 ATP5G1P1-201ENST00000448724 379 ntBASIC20.06■□□□□ 0.8
HPS4Q9NQG7 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
HPS4Q9NQG7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HPS4Q9NQG7 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.06■□□□□ 0.8
HPS4Q9NQG7 WWOX-216ENST00000569818 525 ntBASIC20.06■□□□□ 0.8
HPS4Q9NQG7 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HPS4Q9NQG7 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.06■□□□□ 0.8
HPS4Q9NQG7 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HPS4Q9NQG7 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HPS4Q9NQG7 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HPS4Q9NQG7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
HPS4Q9NQG7 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.06■□□□□ 0.8
HPS4Q9NQG7 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HPS4Q9NQG7 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HPS4Q9NQG7 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.06■□□□□ 0.8
HPS4Q9NQG7 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
HPS4Q9NQG7 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
HPS4Q9NQG7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.05■□□□□ 0.8
HPS4Q9NQG7 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
HPS4Q9NQG7 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
HPS4Q9NQG7 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HPS4Q9NQG7 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HPS4Q9NQG7 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HPS4Q9NQG7 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.05■□□□□ 0.8
HPS4Q9NQG7 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HPS4Q9NQG7 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HPS4Q9NQG7 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
HPS4Q9NQG7 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HPS4Q9NQG7 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HPS4Q9NQG7 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms