Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
TUBB1Q9H4B7 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TUBB1Q9H4B7 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TUBB1Q9H4B7 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.71■□□□□ 0.59
TUBB1Q9H4B7 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
TUBB1Q9H4B7 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TUBB1Q9H4B7 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TUBB1Q9H4B7 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TUBB1Q9H4B7 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TUBB1Q9H4B7 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TUBB1Q9H4B7 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TUBB1Q9H4B7 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TUBB1Q9H4B7 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TUBB1Q9H4B7 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.71■□□□□ 0.59
TUBB1Q9H4B7 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.71■□□□□ 0.59
TUBB1Q9H4B7 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.71■□□□□ 0.59
TUBB1Q9H4B7 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.71■□□□□ 0.59
TUBB1Q9H4B7 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.71■□□□□ 0.59
TUBB1Q9H4B7 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.71■□□□□ 0.59
TUBB1Q9H4B7 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.71■□□□□ 0.59
TUBB1Q9H4B7 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TUBB1Q9H4B7 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.71■□□□□ 0.59
TUBB1Q9H4B7 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.71■□□□□ 0.59
TUBB1Q9H4B7 FP475955.4-201ENST00000623131 1990 ntBASIC18.71■□□□□ 0.59
TUBB1Q9H4B7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TUBB1Q9H4B7 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TUBB1Q9H4B7 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TUBB1Q9H4B7 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TUBB1Q9H4B7 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TUBB1Q9H4B7 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TUBB1Q9H4B7 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TUBB1Q9H4B7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.71■□□□□ 0.59
TUBB1Q9H4B7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.71■□□□□ 0.59
TUBB1Q9H4B7 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TUBB1Q9H4B7 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TUBB1Q9H4B7 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TUBB1Q9H4B7 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TUBB1Q9H4B7 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
TUBB1Q9H4B7 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.7■□□□□ 0.58
TUBB1Q9H4B7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.7■□□□□ 0.58
TUBB1Q9H4B7 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
TUBB1Q9H4B7 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
TUBB1Q9H4B7 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TUBB1Q9H4B7 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TUBB1Q9H4B7 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TUBB1Q9H4B7 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TUBB1Q9H4B7 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TUBB1Q9H4B7 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TUBB1Q9H4B7 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.7■□□□□ 0.58
TUBB1Q9H4B7 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.7■□□□□ 0.58
TUBB1Q9H4B7 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
TUBB1Q9H4B7 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.7■□□□□ 0.58
TUBB1Q9H4B7 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.7■□□□□ 0.58
TUBB1Q9H4B7 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TUBB1Q9H4B7 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TUBB1Q9H4B7 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TUBB1Q9H4B7 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TUBB1Q9H4B7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TUBB1Q9H4B7 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TUBB1Q9H4B7 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TUBB1Q9H4B7 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.7■□□□□ 0.58
TUBB1Q9H4B7 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TUBB1Q9H4B7 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.7■□□□□ 0.58
TUBB1Q9H4B7 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.7■□□□□ 0.58
TUBB1Q9H4B7 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TUBB1Q9H4B7 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TUBB1Q9H4B7 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TUBB1Q9H4B7 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.69■□□□□ 0.58
TUBB1Q9H4B7 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TUBB1Q9H4B7 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.69■□□□□ 0.58
TUBB1Q9H4B7 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.69■□□□□ 0.58
TUBB1Q9H4B7 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.69■□□□□ 0.58
TUBB1Q9H4B7 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.69■□□□□ 0.58
TUBB1Q9H4B7 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TUBB1Q9H4B7 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.69■□□□□ 0.58
TUBB1Q9H4B7 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TUBB1Q9H4B7 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.69■□□□□ 0.58
TUBB1Q9H4B7 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.69■□□□□ 0.58
TUBB1Q9H4B7 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.69■□□□□ 0.58
TUBB1Q9H4B7 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
TUBB1Q9H4B7 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TUBB1Q9H4B7 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TUBB1Q9H4B7 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TUBB1Q9H4B7 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TUBB1Q9H4B7 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.69■□□□□ 0.58
TUBB1Q9H4B7 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.69■□□□□ 0.58
TUBB1Q9H4B7 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.69■□□□□ 0.58
TUBB1Q9H4B7 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.68■□□□□ 0.58
TUBB1Q9H4B7 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TUBB1Q9H4B7 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.68■□□□□ 0.58
TUBB1Q9H4B7 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TUBB1Q9H4B7 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.68■□□□□ 0.58
TUBB1Q9H4B7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBB1Q9H4B7 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBB1Q9H4B7 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBB1Q9H4B7 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.68■□□□□ 0.58
TUBB1Q9H4B7 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBB1Q9H4B7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TUBB1Q9H4B7 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.68■□□□□ 0.58
TUBB1Q9H4B7 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms